Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00457 | ATGGCTGCTGCTGCTTCTTCTTCTTCTTCATCTCTTTTCCTTATTATCTTCTTCTTTTGCTTCCTGTTTACACTCTTGTTCATCTCCCAAGCCACTGTTCCTCCCTCCGAAACCTTCCGATACGTTAACGAAGGCGAATTCGGCGATTCCGTTGAAAGATCAACCGAATACGACGCATCCTACCGTTCTCTTCCGCTATTCACCACCCCTTTCCGCCTCGCTTTCTATAACACCACCCCCAATGCCTACACTCTCGCTCTTCGCATGGGCATCCGCAGTGACCGATCCCTCGTGCGTTTCGTCTGGGAGGCCAACCGCGGACGCCCCGTTCGCGAAAACGCCACCCTCTCGTTCGGATCCGACGGAAACCTCGTCTTGGCCGAGGCCGACGGCCGGATCGCGTGGCAGACCGACACCGCCAACAAGGGCGTCGTTGGGTTCGCCATCCTCCCCAACGGCAACATCGTGCTACGCGATGCTGCCGGTAATTTCATCTGGCAAAGCTTTGATTCCCCGACCGACACCCTCTTGTACGGTCAGAGCCTCCGTGTCGGAGGCCCCAATAAGCTCGTCAGCAGGGCCTCCGCTACGGAGGCCGTGGACGGCGTATACAGTTTCGTCTTGGAGCCCAAACGGTTGGCTTTGTATTACAAGAAGACGATGCTTTACTGGTCGTCCACGTTCCCCGAAGTCGACAAGGCTAGCGGAGGTTTGGTCAACGCGACGCTAGAGATCGCGGAGGCCGAATACAGCGACGCCAATTACAACTCGCTCCGGTGTCGTATGGCCAACGCCTTTGACGAGCCGACTGTGTTACTCGGTACGAACCGATACAACAGCACGCTTTCGTATCTCCGGTTGGGGATCGATGGGAACCTGAGGCTGTACGGGTACCGTAGAGATGCGAATGCGGCCGCGTGGAGCCTGTTGTTCACTTGGTTCAATAGAGAGTGGACCAACTCGTTGGAGGGGGTCGAGGACGAGTGCCAATTGCCTGATCGGTGCGGGAAGTTTGGGGTTTGCGAGGACAGCCAGTGCGTCGGGTGCCCGACGCCCAAGGGCGTTTTCGCGTGGAGCAAAGATTGCGCTGCCAAGCTGCCGGGATGCCAGGCGAGTGGTTTTCGTTATTACGAGGTCAAAGGGGTGGACCATTTCACGGTGAAATACAGTTCCGGGACGGGCCCGGTGGATCGGAAGGCTTGCGAGAGCAAATGCACCAAGGATTGCAAGTGTTTGGGGCTCTTGAGGTATAACCCGAACTTGCAGAGCACTTCTTGCGAGGTTATATATATGTTTCTCGATAGGGAATTGAGGAAATTGAAGGGTAGCCAGTGTGTGGCTGTTCCGACGTCAAATGGGCTAAGTGGGTGGAATCAGGATTGCGAGTCGAAAAAGGTGACATCTTGTAAGGGTGGTGAGTTTGGATGTTTCAACCCGGAGCTCGGGGTGAATCAGTTCTAG | 1461 | 55.58 | MAAAASSSSSSLFLIIFFFCFLFTLLFISQATVPPSETFRYVNEGEFGDSVERSTEYDASYRSLPLFTTPFRLAFYNTTPNAYTLALRMGIRSDRSLVRFVWEANRGRPVRENATLSFGSDGNLVLAEADGRIAWQTDTANKGVVGFAILPNGNIVLRDAAGNFIWQSFDSPTDTLLYGQSLRVGGPNKLVSRASATEAVDGVYSFVLEPKRLALYYKKTMLYWSSTFPEVDKASGGLVNATLEIAEAEYSDANYNSLRCRMANAFDEPTVLLGTNRYNSTLSYLRLGIDGNLRLYGYRRDANAAAWSLLFTWFNREWTNSLEGVEDECQLPDRCGKFGVCEDSQCVGCPTPKGVFAWSKDCAAKLPGCQASGFRYYEVKGVDHFTVKYSSGTGPVDRKACESKCTKDCKCLGLLRYNPNLQSTSCEVIYMFLDRELRKLKGSQCVAVPTSNGLSGWNQDCESKKVTSCKGGEFGCFNPELGVNQF | 486 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00457 | 486 | Gene3D | - | 71 | 170 | IPR036426 | - | |
| Cati3g00457 | 486 | ProSiteProfiles | Bulb-type lectin domain profile. | 49 | 170 | IPR001480 | - | |
| Cati3g00457 | 486 | SMART | blect-4 | 55 | 172 | IPR001480 | - | |
| Cati3g00457 | 486 | CDD | B-lectin | 55 | 172 | IPR001480 | - | |
| Cati3g00457 | 486 | Pfam | D-mannose binding lectin | 100 | 184 | IPR001480 | - | |
| Cati3g00457 | 486 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 69 | 449 | IPR051343 | - | |
| Cati3g00457 | 486 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 80 | 225 | IPR036426 | - | |
| Cati3g00457 | 486 | PIRSF | SLG | 440 | 478 | IPR035446 | - | |
| Cati3g00457 | 486 | PIRSF | SLG | 3 | 443 | IPR035446 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00457 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:3972486 | Cati3g00457 | Cati-Chr3:3992572 | dispersed | |
| Cati | Cati-Chr3:3977481 | Cati3g00457 | Cati-Chr3:3992572 | tandem |