Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00471	CAAACATCAAGTAAACGACTATGAATTTAAAATTCAAAAAACAAAGTTACACCACAAAGTTAAAAAATGAATCTTTTCCCTCCTTATTTTTTACACTTCTTTTTATCCACCATAAAAGGAAAAAAAAAAGAAAAAAAAAAGAGAAGGCAAAAAGGAAACCAGAAAGCAGAGAGAGAAAGAAAGAGAGCTTATTGAGAAGTGTGAAGTTTTTGTAGCAGAGAAAGAGAGCAATCCAATACCTGCTTTGATTTGCAGTTTGAACACAAATAGCAGCAGAGGAAGAAGAAGATCCATTCAAGTACAAACCTTCACTTCACATCCATAAACCCATCTGCCTGATCACCACCCACAAACTCTGATCTCCTTTTTCTCCCAAATGAGGGTTTCACTTTCACCCCTTTTTCTCATTTTCTCAGCCTTCACCTCCATTTATGTCTTCCATTTTCAAGCTCAAGCCTCTCCTGCTGCTCCGGTGATTAAGCAATTATCTTCCATACTTAAGTGGACAGCTAGGTCTTCATCTAAATCACCATCATCAGATGGGAATATTCTTCAATTTGAGGAAGGATATTTGGTAGAAACTGTTGTTGAAGGGAATCAACTAGGGGTTGTGCCTTATTCCATCCGGGTATCGCAGGATGGTGAACTATTTGCTGTTGATGCAGTCAATAGTAACATCGTTCGAATTACTCCTCCATTGTCACAATATAGCAGGGCGAGATTGATTGCTGGGTCCTTTCAGGGTTACACTGGACATGTAGATGGAAAACCAAATGATGCTCGTTTTGATCGTCCTAAAGGGGTTGCTATGGATGATAAAGGGAATGTTTATGTTGCGGATACCTCTAATCTTGCCATCAGAAAAATCGGTGAAGCAGGTGTGACGACAATTGCTGGAGGCAAATCAAATGTAGCAGGGTATAGGGACGGGCCAAGTGAGGATGCACAGTTTTCAACCGACTTTGATGTAATTTATGTGAGGCCAACCTGTTCTTTGCTAGTTATTGACCGAGGAAATGCCGCTCTTCGACAAATTTCTCTCAATCAAGAGGATTGTGATTTACACTACAGCTCCGTGTCTTCCACAGATCTTGTTCTGGTAATTGGTGCTATCTTGATAGGATATGTTGTATGCATGCTTCAACAAGGATATGGTCCCTTGTATTTCTCAAAAGTGCATAAGGTGGAGAATGATGCGAAAGGATCAAGCAAGGAACCACAACCGCCCACCAAAACCCAAACTCCAACTGTGGAAACCATTAGAGAGGAACAAGAAGCAGGATGGCCATCTTTTGGACAGCTTATTCTGGATCTATTCAAACTCGCTCTCGAAGGTTTTGGTAACATGTTTGCGTCTTTCAACCCCTTACAAACTCCTAAAAAAGGCCTCACCCCATTAAAAGATTCTCTCATAATGCCTGAAGACGAGCCCGTTAATCAGCCCCCCTTAGTTCAAAAGCACCGAACCCCAACCCCTCTTTCAGAAACCCGCCATGCCCACAATCCAAACGAAAAATACCCAGAAGCAAAGCCCACTAAGCTCAGATCATCCAGCTTAAAAGATCCAAGCAAGCACAGAGCCTCAAAGAGAGAAGAATATGCCGAGTTTTACGGGGCTAGTGGCGAAGCTCCTCATGTTCGGTCTAAAAGCCAGAAGGAAAGAACAAAGCATCGGCCGAGAGACAAACGAGCAGAAGTTCCGTTCTCGGGAGAGCAAAAACCGGTTGACCTAAAACCGGTCAACTACGATGATCCTAAGTTTAGCTATATGAGGAACAAGTACGGAGATTCATATCGTTACAATTAAAAGTTGTACAAATTTTCTAGTGATGTAGGCTTTGCCAAAACTAAACTTTGAGATATTTTTGCATCCGGGTTGTCGTTGCTTTCGTATCTTGGTGGCTTTAAGTGTTTGTACAGTGGGATGATGAATTTGTACCATGGGTAGGTGCTAAAGCTGCTGAAAAATGACTGGTTAAGGTGGCTTCTGTTTCAGGAAAAGTTCTTTTTCTTGAGATAGATTTTATCCAACAAAGTATCTTAATGGAAACTAGTTGCCTGCAAATCACATGAATCTGAAAAGGTGAAACTTTTTATCACGAGAAAGACAAATGGAGCTTCCCAACCACTCCTATTTAAATCTTTCTGAGATTTCTTTATTTGTCTTGATATTTACTACCATAGCTAGCTAGCTTCAACCACTGTCTGTATAGTTTTAAGCAGATTGCAGAGACCAAAAATGGGTTGTGTCGGATCGTCGTTAAATAAACAAGACCGTAAGTCTTTTTCCCACTTTGATTCTTTGTTTTCATATAAATGGATAAACAACAGGTAAGGTCTGTATACGTCCTGCCCTTTTCAGACCCTACTCTCTGTTGGATTCATCGAGTTCATTAGGGTTTTGGATTTCCTTGATTGACGAACATGGGTCTTTCTTTATCTCAATGGCAGGAACGGTGAAACAGATAAGGAAGCCAAAGCCGTGGAAGTTCCCACGGCCGGTTACATGGAGTCAGCTGGTGCAAATGCGTGACGAGTTCTGGGATACGGCTCCTCACCATGGTGGCAAGAAAGCTGAGGCTGATATAGAGCTTGCTCAAGCAATTGTGGACAGTGCAGGGGTCATTGTTCATAAACCTGATATGACAGTACCAAATACGAAATACCAAGGTATGTGTTGAGCGAGCCAACAAACTTGATACAACTAAGTTGAAAGCACGGGAAACACAAAGCGGAAAACTGTAGTGAAGGAAAGGCTGTGTATCGTGTATAATCGTTTGCTCTGAGTAGTTTTTCAGGCCTGGTTCACTTTTACTTTTGAACTTTTCCAGGCTTATGATTTTCATTGTGATACCAACACTTCAAATATCACTCTTCTGATGAGTTTTTAGGCATATTTTTGTGATGATTCCCAGCACTTGCTATTAAAAATAAACTGCA	2940	41.16	MAGTVKQIRKPKPWKFPRPVTWSQLVQMRDEFWDTAPHHGGKKAEADIELAQAIVDSAGVIVHKPDMTVPNTKYQGMC	78

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00471	78	Gene3D	-	21	76	IPR038169	-
	Cati3g00471	78	Pfam	Ubiquitin-binding domain	6	68	IPR032752	-
	Cati3g00471	78	PANTHER	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	6	69	IPR039869	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00471	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr1:79845022	Cati3g00471	Cati-Chr3:4380118	dispersed
	Cati	Cati-Chr3:4380118	Cati4g01960	Cati-Chr4:72078695	dispersed
	Cati	Cati-Chr3:4380118	Cati1g01927	Cati-Chr1:51239202	transposed