Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00556 | GTTTTATCTATTACTAATAGAGACTAGTTTTATCTCTTAATTATTCATATGTTATCTATTAATAAAATAGTTATTTTATATATAAATGATTTAAAAAAAAATTATAATATTTTTTAAATTGATAAACATTTGGGAGAAAATAAGCAGGCTTGGAATTCAGATTTCCTTTTTACCCTAGAAAACGTATTCTCTGGTTGATCGTCTGCTCGTTTATCTCCTCCTCTCACAGATATTCTTCCTGTTCCATCAGTTTGATCGGTAAGAAAGAAAGAAAGAAGAGATGGCAGAGAGAAAGGTGTTGAATAAGTATTATCCGCCGGATTTTGATCCGGCAAAGATTCCAAGGAGGCGTATGCCCAAGAATCAACAGATAAAGGTTAGGATGATGCTTCCGATGAGCATTCGCTGCAGCACGTGTGGAAACTACATCTACAAGGGTACCAAGTTCAATTCACGTAAGGAAGACGTTATTGGAGAGACATATCTTGGAATTCAGATATTCAGGTTCTATTTTAAGTGCACCAAGTGCTCAGCTGAGATTACCATGAAGACAGACCCACAAAACTCTGATTATGTTGTTGAGTCTGGAGCTGCTAGAAATTTCGAGCCTTGGCGTGCAGAGGATGAGGTGGTAGATGAGGAGCAAAGAAAACGAGATGCTGAAGAGATGGGAGATGCAATGAGGTCTTTGGAGAATAGAACGCTTGATTCAAAAAGAGAGATGGACATCCTTTCTGCTCTCGATGAAATGAAGTCAATGAAGTCTAGGCATGCTGGTGTAAGTGTAGATGCGATGCTTGAAGCTTTGCAACGCTCAGCTCCTGTGATACAGGAGGACAAGCTTGAAGAAGAGGATGAAGCCCTTATAAAATCCATCTTCCAGGGATCAAAAGAGTTTGTGCGTAGAATTGATGATGATGAGCTCGAAGACGACGATGAACTAACAATTTCGGGCAGTGAAACTTCACAACTTAGTTCTAAGAAGAGGAAGGCAACCGAAGATCGTGCAACAGATTACCTTACGAAAACCAGTACTAGTAGCAAGAGAGAAGTTGAAAGGGGCGGTGGAAGTAGCATTGTTCTTAAGTCTTCGACAGTCAAGTTTTCCGTTGTGAAGAAGGCATCATCAGATGCAAATGTAGAAGAGAAGAAGGCGGAAGTTACAAGTACTACTGGACTACAATCTCTATGCCAACAATATGATACTACTGATGATGAAGAAGAGTAATCAAACCATATTTTGACTGGTAACTGCCAGCTTTTTTTAATATCCTGATGATTGTTTAGACTAGAGAAAGAGAGAATTAATTGGGTTACTGTAATACTGTTTTATGATGAAATTGGAAAGATTTTGAATTTAGTACTTGCCCATTCATATATAATAGGGAAAATAGAAGAATTACATTTACTCTAGAGATGGAGAAACCTGTTACCAAGTATATATCTTAACTGATAGTAATTTGTTTAATTGTTCCATACTACCAGAGGTTTCATTATACTATTTTATTAAAGCTGTATAGCAGTTATCTTGAATTTTTTAAGATACTAGTAGGCTGTACAGCCCTTTATCTCCAAAGCACACAATTGAAACCTAAACCTATCAGTTTCCTCTCCAGTCTCGGCTCCACAATCATCAGAAACCCATCTCTCTCTCCACGTTCAACCCAAATTCCTCTCCTCTCAGCTAAACCTCTATGTTAGTGACATT | 1708 | 37.82 | MAERKVLNKYYPPDFDPAKIPRRRMPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEITMKTDPQNSDYVVESGAARNFEPWRAEDEVVDEEQRKRDAEEMGDAMRSLENRTLDSKREMDILSALDEMKSMKSRHAGVSVDAMLEALQRSAPVIQEDKLEEEDEALIKSIFQGSKEFVRRIDDDELEDDDELTISGSETSQLSSKKRKATEDRATDYLTKTSTSSKREVERGGGSSIVLKSSTVKFSVVKKASSDANVEEKKAEVTSTTGLQSLCQQYDTTDDEEE | 315 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00556 | 315 | PANTHER | SPLICING FACTOR YJU2 | 1 | 288 | IPR007590 | GO:0000398(InterPro)|GO:0008380(PANTHER)|GO:0071006(PANTHER) | |
| Cati3g00556 | 315 | MobiDBLite | consensus disorder prediction | 279 | 315 | - | - | |
| Cati3g00556 | 315 | Pfam | Saf4-Yju2 protein | 9 | 297 | IPR007590 | GO:0000398(InterPro) | |
| Cati3g00556 | 315 | MobiDBLite | consensus disorder prediction | 214 | 263 | - | - | |
| Cati3g00556 | 315 | Hamap | Splicing factor YJU2 [YJU2]. | 1 | 311 | IPR043701 | GO:0000398(InterPro) | |
| Cati3g00556 | 315 | MobiDBLite | consensus disorder prediction | 292 | 307 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00556 | K13115 | coiled-coil domain-containing protein 130 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:5553096 | Cati3g00556 | Cati-Chr3:5553096 | dispersed | |
| Cati | Cati-Chr3:5553096 | Cati3g00556 | Cati-Chr3:5553096 | dispersed | |
| Cati | Cati-Chr3:5553096 | Cati3g00556 | Cati-Chr3:5553096 | tandem |