Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00578	ATGTTGGATTTGGACTTAATTAGGGTATTGAACCGATACATTGGGACTTACATTACCTATGGATTATCTAGGACACTCGTAGGCTCGGGATTAAAAAGTTTGGATTTCGCACTAACCGCTAAGCTATTCAAGCGCTATTTGGTAAAGTGGACCCACCCTTTGTATACTGACGAGTATAGGGTGCACGTAATCATATGTGGTACTACACATGTGGGATTTAGTCCCACCGCTGAGGTAGTGCAGCGTCTACACATGTGGGGTTTTAGTCCCACCGCTGAGGTAGTTCGCGAAAGCGCTCTACACATGTGGTTCGCTACCACCTCTGAGTTAATTCACGCACACGTCCCGACACGAAGTCGACGAGGTATCTGGAATCCATTCGGGCATCCGACTAATCCTCGGCGACCATGGACCGACCCCAAAGTCAACCCATGGTCAGGGGAAAGAAGAGATATGGAGGTAACCAATGTGAGTGAGTATCAGGCAATTGCCAAGGAGAAGTTGCCAAAGATGGTCTATGACTACTATGCTTCTGGTGCTGAGGACCAGTGGACCCTAGAAGAGAACCGGAATGCTTTCTCGAGAATCCTGTTTAGGCCTCGGATTCTTATTGATGTGAGCAAGATAGACATGACCACAACCATTTTGGGATTCAAGGTGTCTATGCCCATCCTCATAGCCCCAACAGCAATGCAGAAGATGGCTCACCCTGAAGGTGAATATGCAACAGCTAGAGCCGCATCTGCAGCTGGGACTATTATGGTTAGTAGTTCCTCTATTCTCGACACTAGTCAAGGTCTTAATGGGAATACCCACTTTTCCCTTTGGGGTAGAGGACATACACTGTCATCATGGGCTACATCTAGTGTTGAGGAGGTTGCTTCAACAGGACCTGGAATCCGCTTCTTCCAGCTTTATGTGTACAAGAACCGTAACGTTGTGGCTCAACTTGTGAGAAGAGCTGAAAAGGCCGGCTTCAAAGCTATAGCTCTAACAGTCGACACACCAAGACTCGGCCGTCGAGAAGCTGACATCAAGAACAGATTCACTTTACCACCGTTTTTGACATTGAAGAACTTTGAGGGTCTGGACCTTGGCAAGATGGATGAAGCTAACGACTCCGGATTAGCTTCTTATGTTGCTGGTCAGATCGATCGCACTTTGAGCTGGAAGGATGTGAAGTGGCTTCAGACGATCACTACGATGCCGATCCTTGTGAAGGGCGTGATCACTGCCGAGGATACAAGGTTAGCTATTCAAGCCGGAGCAGCGGGTATTATCGTCTCCAATCATGGAGCTCGTCAACTTGATTACGTCCCAGCCACCATCATGGCTTTGGAAGAGGTTGTGAAAGCTGCACAAGGGCGTGTACCTGTATTCTTGGATGGTGGTGTCCGGCGTGGTACGGATGTTTTCAAGGCTCTGGCGCTTGGAGCTTCCGGCATATTTATTGGAAGACCTGTGGTGTTTTCCTTGGCTGCTGAAGGAGAAGCTGGAGTGAAGAAAGTGCTTCAGATGTTACGCGATGAATTCGAGCTAACCATGGCATTAAGTGGTTGTACCTCGCTCAAAGAGATTACCAGAAATCACATTGTTACCGAGTGGGATGCTCCTAAGGCTCGCCCTGCACCAAGGTTATAGATGAAACATATAGATGCATCTTGAAAATGCTCAGAGTTATGTTTGAAAGCTGTATGAATCTATAAATTTCCTAAATGTCAATCACTGCACTTGTACATTCTTCCTTGTGAGCCATCTGGGGTTCGGTGATATATCAATCGAGATACACTTGCATAGAATAATGGATCCTGTACTGGACACTTTTCAAAAGCAATTTCACCCCTTTCACATCTTAGGGTTATGTGAAATTCACTTTGGGATGGTCCAATTTTGCATTTTTTTCAAAAAACAAGAGAAACAGTCGAGATTCTATTATGTTTTCAGTATGTTAATCAACAGTTGTTTTGGAAGGAAGAATAGTTATTTCAG	1989	45.85	MLDLDLIRVLNRYIGTYITYGLSRTLVGSGLKSLDFALTAKLFKRYLVKWTHPLYTDEYRVHVIICGTTHVGFSPTAEVVQRLHMWGFSPTAEVVRESALHMWFATTSELIHAHVPTRSRRGIWNPFGHPTNPRRPWTDPKVNPWSGERRDMEVTNVSEYQAIAKEKLPKMVYDYYASGAEDQWTLEENRNAFSRILFRPRILIDVSKIDMTTTILGFKVSMPILIAPTAMQKMAHPEGEYATARAASAAGTIMVSSSSILDTSQGLNGNTHFSLWGRGHTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVAQLVRRAEKAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVKWLQTITTMPILVKGVITAEDTRLAIQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVKKVLQMLRDEFELTMALSGCTSLKEITRNHIVTEWDAPKARPAPRL	546

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00578	546	ProSiteProfiles	FMN-dependent alpha-hydroxy acid dehydrogenase domain profile.	149	536	IPR037396	-
	Cati3g00578	546	FunFam	hydroxyacid oxidase 2	273	536	-	-
	Cati3g00578	546	PANTHER	S -2-HYDROXY-ACID OXIDASE-RELATED	152	530	-	GO:0005777(PANTHER)\|GO:0008891(PANTHER)
	Cati3g00578	546	ProSitePatterns	FMN-dependent alpha-hydroxy acid dehydrogenases active site.	429	435	IPR008259	GO:0016491(InterPro)
	Cati3g00578	546	CDD	alpha-hydroxyacid-oxid-FMN	158	528	IPR012133	GO:0010181(InterPro)\|GO:0016491(InterPro)
	Cati3g00578	546	Gene3D	Aldolase class I	151	545	IPR013785	-
	Cati3g00578	546	Pfam	FMN-dependent dehydrogenase	164	259	IPR000262	GO:0016491(InterPro)
	Cati3g00578	546	Pfam	FMN-dependent dehydrogenase	280	532	IPR000262	GO:0016491(InterPro)
	Cati3g00578	546	SUPERFAMILY	FMN-linked oxidoreductases	153	533	-	-
	Cati3g00578	546	MobiDBLite	consensus disorder prediction	124	144	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00578	K11517	(S)-2-hydroxy-acid oxidase [EC:1.1.3.15]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:5946584	Cati5g01408	Cati-Chr5:16954289	dispersed
	Cati	Cati-Chr3:5946584	Cati7g03164	Cati-Chr7:68265068	wgd