AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00588 GATACCACAACACACCCCTCTCACAATCACAATCTCTTCTTCTTCTTTGCAATTCCACACACACACATACACACACACACACAAAAAAAACAATTATAACCTGCAAAATCTTAATTTTGTGGTCAACAAATGGCTGAATCCAAGAGAGAAAACAAGACTAGTAGCATCACAGGAACTACCTCTCAACAAATGATCATGACTACTGCTGAAGATGGAAATTCCGGCATCCGGACGGTGGAGACGCTGCTGAGGCTGCTTCCGGTGGGGCTGTGCGTGGCGGCGTTGGTCGTCATGCTTAAAGATTCCGAAACTAATGAATATGGATCTCTTTCTTACTCCAACCTCACTGCTTTCAGGTTTTTGGTGCATGCCAATGGCATATGTGCCGGTTATTCGCTACTGTCGGCTGCTTTCACGGCCGTACCTCGACCGATAACCATGTCGAGAGCTTGGACCTTCTTCCTCCTTGATCAGGTTTTAACATACCTGATACTGGCGGCGGGTGCGGTGGCGACGGAGGTGGCGTTTCTAGCATACAAAGGAGATGTGACGGTGACGTGGAGCGAGGTGTGTGGAACTTACGGCGACTTCTGCCGAAAGGCGACGGCCTCCATTATCATCACTTTCATGGTGGTCATTTGCTACGTTTTGCTCTCTCTTATCTCATCCTACAGGCTCTTCAGCAAATATGATGCACCACTTGGCTATAAAAATAATAAGGGGATAGAGATCGTCGACTTTGGGAATTAATTAGGAGATCCTCTTTTCTATTATATATGTATAATAAGATTATAAATTATGAATAGAGATTTATATATTATGATGATGATGATGATATTGTTGTTCTTAATTGGGTTTTGTAAATTAGCTTTCGAATCTTAATATTCTTGGCTATTAAAAATAGATTTCTTTGTAAGTGTCTTTTACTCGACAAATGTAATTATGGGTAAGGATTTAGGGTTGTGGCGTACTGGCAAAAAGGCATGCGGAGATGTGGTGGAATACAGTGGCGGAGCCAGAATTTTCTATGAGGGTGATCCTTTCTTTCGACTATATTTTCTACATGATTGCCAATAATTTTTTGATTGTGTCGAGTCTCTATGATGGAACTTTGATATAATATGAGGATATGTGACACCCTTTTAATATTTTTTTCTAAAAAAATATTTATAATATATATATATATACAAACACACACATA 1201 40.38 MAESKRENKTSSITGTTSQQMIMTTAEDGNSGIRTVETLLRLLPVGLCVAALVVMLKDSETNEYGSLSYSNLTAFRFLVHANGICAGYSLLSAAFTAVPRPITMSRAWTFFLLDQVLTYLILAAGAVATEVAFLAYKGDVTVTWSEVCGTYGDFCRKATASIIITFMVVICYVLLSLISSYRLFSKYDAPLGYKNNKGIEIVDFGN 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00588 206 NCBIfam plant integral membrane protein TIGR01569 40 181 IPR006459 -
Cati3g00588 206 Pfam Casparian strip membrane protein domain 31 171 IPR006702 -
Cati3g00588 206 PANTHER CASP-LIKE PROTEIN 4A4 34 185 - -
Cati3g00588 206 MobiDBLite consensus disorder prediction 1 20 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00588 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:6087851 Cati9g02013 Cati-Chr9:21676841 dispersed