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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00628 CCTCTTATGGCCTTCACATCTTCTTCCTTCAACTCCATGGATTCACCTATAAAATACTTAACATTCTTTCTCATCCATATATACAACCATCTTCTCTAAAACCTCTTAATTACTCGAAAACACATATCTAGATCATCCTGAAATACATATAGATATGGCCAAGCAAAATATCGTCGTGAAGGTGGCCATGTTCGACGCCAAGAAAACTCGTAAGGCTCTGAAGATCGCAGTTGGTGTCTCCGGTGTGGAATCAGCGGCTCTGATTGGTTCAGATAAAGATCAAATCAAGGTGACCGGGGAAGGAATTGACTCGGTCGAACTCGCCAAGCTGCTAAGAAAAGGTGTAGGATGCACTGAACTGGTGAGTGTTGGTCCCGTGGAGGAGAAGAAACCCGCTGCCGCCGCTCCTGCCGCCAGTAAACCGCCAGCTACGGTGGTGCCACTGCAAGTTTATCCTCACCATTATTATAGCAACTACGGAGGACCGTACTACCATGTCTATGAAAGTCCCAGCAATGACGATCCCTCGTGCACCATCATGTAAATTGGCAGAAATCAAAAAGATTAAAACAAGTTTGATTTTAACCCACAAATAAAGATCATCTCATGAAGGCCATATGAAATTGGTGGTTATCCAGACATCCAAAGTTGAAAAACAACACCACAAATAAACAAAAAAAAAAGTTCCATTTTTGATAGGTATTTAATTATTTATTCTTGGGATTTCTCATGTATTCATTTATGTAATGATTGTTTATGGATAAATTTTGACATTTTGTAAGAATTTTCATCCTCAACTCTATTGTTATGTTGTCGATTTCATTTAGAGGT 831 39.95 MAKQNIVVKVAMFDAKKTRKALKIAVGVSGVESAALIGSDKDQIKVTGEGIDSVELAKLLRKGVGCTELVSVGPVEEKKPAAAAPAASKPPATVVPLQVYPHHYYSNYGGPYYHVYESPSNDDPSCTIM 129
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00628 129 Gene3D - 1 78 - -
Cati3g00628 129 PANTHER OS04G0464100 PROTEIN 4 129 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00628 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:6667649 Cati3g00628 Cati-Chr3:6687259 dispersed
Cati Cati-Chr3:6687259 Cati3g00632 Cati-Chr3:6760825 dispersed
Cati Cati-Chr3:6684826 Cati3g00628 Cati-Chr3:6687259 tandem
Cati Cati-Chr3:6687259 Cati3g00629 Cati-Chr3:6687500 tandem