AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00629 ATTCAATGTTTAATTTTGCAGCAAAATATCGTCGTGAAGGTGGCCATGTTCGACGCCAAGAAAACTCGTAAGGCTCTGAAGATCGCAGTTGGTGTCTCCGGTGTGGAATCAGCGGCTCTGATTGGTTCAGATAAAGATCAAATCAAGGTGACCGGGGAAGGAATTGACTCGGTCGAACTCGCCAAGCTGCTAAGAAAAGGTGTAGGATGCACTGAACTGGTGAGTGTTGGTCCCGTGGAGGAGAAGAAACCCGCTGCCGCCGCTCCTGCCGCCAGTAAACCGCCAGCTACGGTGGTGCCACTGCAAGTTTATCCTCACCATTATTATAGCAACTACGGAGGACCGTACTACCATGTCTATGAAAGTCCCAGCAATGACGATCCCTCGTGCACCATCATGTAAATTGGCAGAAATCAAAAAGATTAAAACAAGTTTGATTTTAACCCACAAATAAAGATCATCTCATGAAGGCCATATGAAATTGGTGGTTATCCAGACATCCAAAGTTGAAAAACAACACCACAAATAAACAAAAAAAAAAGTTCCATTTTTGATAGGTATTTAATTATTTATTCTTGGGATTTCTCATGTATTCATTTATGTAATGATTGTTTATGGATAAATTTTGACATTTTGTAAGAATTTTCATCCTCAACTCTATTGTTATGTTGTCGATTTCATTTAGAGGT 689 40.78 IQCLILQQNIVVKVAMFDAKKTRKALKIAVGVSGVESAALIGSDKDQIKVTGEGIDSVELAKLLRKGVGCTELVSVGPVEEKKPAAAAPAASKPPATVVPLQVYPHHYYSNYGGPYYHVYESPSNDDPSCTIM 133
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00629 133 Gene3D - 5 82 - -
Cati3g00629 133 PANTHER OS04G0464100 PROTEIN 8 133 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00629 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:6632759 Cati3g00629 Cati-Chr3:6687500 dispersed
Cati Cati-Chr3:6684826 Cati3g00629 Cati-Chr3:6687500 dispersed
Cati Cati-Chr3:6687500 Cati3g00632 Cati-Chr3:6760825 dispersed
Cati Cati-Chr3:6687259 Cati3g00629 Cati-Chr3:6687500 tandem