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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00631 ATGCACTGCGAGAAGAAAGCTCGTAAGGCTCTTCAGGTCGTCGTTAGTGTTTGCGGTGTGGAATCGGCAGCCTTCGAGGGTCCAGATAAAGACCAGATAGCGGTGATCGGAGAAGGAATTGATTCGGTGAAACTCACATCTAAACTAAGGAAATGTGTAGGGCACACAGATCTGGTAAGTGTTGGTCTGGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAATCCACGCCCACCATGGAATTTTGTCCGTCGTACCCATACACGTACCCGTACTACTATGGTTGCTATGTAAATTACGCCGTGAGTAAGATGTTTGGAATTGGTGAGTCGGAAGATGAAGTTCAAAACTTGGCATATTTCATTAACTGTGACCACGACAAACTCCCTTCTCCTACCTTGGTGATATAA 408 46.57 MHCEKKARKALQVVVSVCGVESAAFEGPDKDQIAVIGEGIDSVKLTSKLRKCVGHTDLVSVGLEEEKEKEKEKESTPTMEFCPSYPYTYPYYYGCYVNYAVSKMFGIGESEDEVQNLAYFINCDHDKLPSPTLVI 135
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00631 135 Gene3D - 1 67 - -
Cati3g00631 135 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 47 1 95 IPR042885 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00631 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:6696780 Cati3g00633 Cati-Chr3:6773612 dispersed
Cati Cati-Chr3:6696780 Cati3g00632 Cati-Chr3:6760825 tandem