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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00632 ATGGCCAAGCAAAAGATTGTGGTGAAGGTGACCATGAACACCGACAAGAAATCTCGCAAGGCTCTCAAGATCGCCGTTAGCCTCTGCGGTGTTGAATCGGCATCATTTGTGGGATCAGACAAAGACCAGATCGCGGTGACCGGTGAAGGAATCGACTCCGTGGAATTGGCGACTTTGCTAAGGAAAGGTGTCGGATACACAGAGCTGGTTAGCGTTGGTCCCGTGGAGGAGAAGAAACCCGAGGCCAAAGAATCGAAAGCATCCGTAGTGGAAGTTAATCCTTACCAGTACTACTACAACTACTATGGAACTCCCTACTATGTCTACGGAATGTGA 336 49.4 MAKQKIVVKVTMNTDKKSRKALKIAVSLCGVESASFVGSDKDQIAVTGEGIDSVELATLLRKGVGYTELVSVGPVEEKKPEAKESKASVVEVNPYQYYYNYYGTPYYVYGM 111
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00632 111 PANTHER OS04G0464100 PROTEIN 4 88 IPR044296 -
Cati3g00632 111 Gene3D - 1 78 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00632 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:6398702 Cati3g00632 Cati-Chr3:6760825 dispersed
Cati Cati-Chr3:6446590 Cati3g00632 Cati-Chr3:6760825 dispersed
Cati Cati-Chr3:6687259 Cati3g00632 Cati-Chr3:6760825 dispersed
Cati Cati-Chr3:6687500 Cati3g00632 Cati-Chr3:6760825 dispersed
Cati Cati-Chr3:6760825 Cati3g00635 Cati-Chr3:6842090 dispersed
Cati Cati-Chr3:6696780 Cati3g00632 Cati-Chr3:6760825 tandem
Cati Cati-Chr3:6760825 Cati3g00633 Cati-Chr3:6773612 tandem