AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00650 ATAAGCACTTTTTATCAAAAGTGCTTATTTACTTAAAAAGCAATCCCAAACACCCTCTCAGTTCCACTGTCGAACATATAGCTCATCGGAAAATTGGCCGTAAGACTGCTGATCGCCGGCGCCGGAAACCACAAAAGCTTCTCAAGCAAACCTCCTGCTGGCAATAACTGAAAGTAGCTTGGGATTCTACTTCTACAGAACAAGAAGATAACTAACTAAGTATGCATAAAACGGCCCAATCGTGGTTCACCGGAGGTCCGAGCCAGAGGAACAGCGATCTCACAACACCACCACCTTCTCTTCTCGCTGATTGGAACGCATACGCCGCTTCTTCACAATCTAGCCAAGATCTAGATTCTTCCGCCCTCGGTTTCGATCTCGAAGCCGCAGTTCGAGATAAGGTTTCCGGCACTTTTAACGTAGTTTCAAAGGGAGTTAGGGACATACCTGGAAATTTGCAGTCTGCCACAAGCAATGTTCCAACCGGGAAATCTTTTATGACGTTTAGCATACTTCTTGCTGTTGGGGTGTTTCTCGTCTTCATTGCGGTCACTGTGTTTCTACCGGTCATGAGACTTCCTATTACGTTGGGCTTTATTGGCAGCATGCTGGGTACCATCTATGTTTCAATGGTGCTTCACAGCTATGTCCTATCTGTCTTCTTCTCCCTTTTACAGGTCATCTCATTGTCATATTATGCAATTTCCTACTTTCCTGGAGGATCGGCCGGTGTGAAATTCTTCACTTCTGCCCTTACTTCTTCAATTCTGAGATGCTTTGGGAGGTGATGTTGGTAATAAGAAGATGTCTATAACTTTTACTCCAATCAAAATTTACATAAAATCCTTCCTTTACAATGCCCATTTCTATCAGACGTGATTTTGATTGATACTTTCATTCTTTTGTGAATCCTTCTACCTACGTACCCTTTTCGGTGGACGGATAGATGTTAACCACGGGTCAACTTTTCGTAGCCATAGATTGTTTAACAGTATCGAGATTGGGTTTGACCGCTTTTCTTCAGAATAGATACTTTATTTAATCAGAATTATAGTCATATACATTCAAGATAACAAACACAAATTCCTCTGAAAATATTGTACCGAGAAGAAAACCAAGGGTTTTGGAAAATATTGAAGCTGCTGTAGACTACTACTAATAAGAAACAAGCAGCTCTCATTTCATTTTGTTACCTTAAATTGCTCCATTCCAACTTGCTAAAATACCGTCATCACACTCGGTTGTGCTACTGGAGGCTACTAGGAAGCCGGAATAAGAAGTAAAGAGTAGGTGTAAAACCTTTATCAAGTTTTGAAGCTTCCTTCTAAAAGTTTGTTCATCCTATATACTTAATCTAAGGGGCTGTTTGGCGATCACTGAATGATTTGATACTGAATGATTAAGATACTCTGTATAATTTAGTGTTGAGTAAAAAATGACTGTTTGGTAAATATTCTGAATCAATAGTCTGAATGACATAAAATTACCATTTTAACCTT 1499 39.89 MHKTAQSWFTGGPSQRNSDLTTPPPSLLADWNAYAASSQSSQDLDSSALGFDLEAAVRDKVSGTFNVVSKGVRDIPGNLQSATSNVPTGKSFMTFSILLAVGVFLVFIAVTVFLPVMRLPITLGFIGSMLGTIYVSMVLHSYVLSVFFSLLQVISLSYYAISYFPGGSAGVKFFTSALTSSILRCFGR 188
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00650 188 PANTHER UNCHARACTERIZED 118 180 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Cati3g00650 188 MobiDBLite consensus disorder prediction 1 22 - -
Cati3g00650 188 Pfam Got1-Sft2-like family 93 165 IPR007305 GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00650 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:7152841 Cati5g00596 Cati-Chr5:6445914 dispersed