AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00652 AGGAGGAACTGAACCCTAGCCCAAAACCCCAAATTCTCACTGAAAACCAAAATCCACCTGCTTCCACCACCAGATCCGGAATCAACAATGGCGTCACCGCTGCCGGTTGACGACAACTCCAACACCAAATCGGAGGAAGGAACAGTTGCCTTCCACAAGAAGCGTGCTCGCCGAGTCAGCTTTGCAGAGAACACCTCTGTCCACATATTCGACCGCGATGAAGACTCCGGAACTCCATTGGATCCTAAGCCTCCTAATTCTCCATCCGACAACTTAGGGTCTGCTGAACGCGATAATGAACCCAACCAGCTGTTCTGGAATGTGGAAGAAGATGATAATGATAACAATAACGAAGATGACGACATGGATGAACCGGGGTCTAGGAGTCCGTTTTTGCGGTTGGCTGGATCTCCGTCCTCCGGTGGAAGTACCATTGGTTCTGCTAACTCCAACGACGAAGATAACTTTTTTGGTCCTGTATCGGCAAATTTCATTAGACGAGATTTACTGGACTCTGCTGGCTCAGATGCAAATCATGATCAGACTATGGATTCAACAGCCTTTTCAATGCATTTTCGTAGCATTGCTAGGTCGGAATCAGAAGTGGAATTGAAAACCTCAACAGGGGTTCACCTTTCCTTCGAGGAGAAGACCGCAACTCAGGATTCTGTTCCCACTAACACAGGAACTCCAATGCTAATGACACTAGCTAAGAAGCAAAATTATCAACCTTCTGTTTCTACCTCCAAAAAGAACACCTCTGCCGAGTCAAATGATATGAGTATTGTTGGAGAATATCATCACAAGTACGACTATGGAGAACTTTCTCCTACGTTGGATGCACTTTTGGCAGAAGGCAATATGGACGTCCATGTGATTGCCCCTTCTAGTGGTTCTATCTTAAAATCACCAAGAAACACTGAAACAACCAAGGAAGATGGGGCTAACTTCATGGATTTTAGTCGTGACGAAGATAAAGAAGGGAATATTACTCATGAGATGGTCAATGAAGTTGTTTCTCTTGAGCATAATGGGCTTGGTGTGGCCAATGATGGATCAAAGTATTCTCCTAGTAAGCAGATTGCATTAGGTGTCTCGTCCTACACAACTGATGCTGAGATTTCTAAATCCATGCTGGCTAGTTCATCTATTTTGATAAAGTCAAGTTTGGACTTCTCTGCTACCAATCAAGATCGTGATCCTAAGAACACAGTTTATTTAGATGATGGTATACGAAAGGAACAAAAATCACCTTTTGTAGGGCCAGTGAACTCTTTAACCGATAAGCCAAGTCACATGCTTTTACATGGTGTTAATCCATATAAGTCACCATCGGTCATGACTCCTCATAGTCATTCAAGTTTTTTCGTAAGACCGGAAATTCCAAAACATGGTGGGAGTGTTGCATCCATACAGAAAAGCATTTCTAAACTCGGAATGCTTGAGGCTTCTCCCTTTTCTGCTGCTTTGAATGCTAAACTTGAAGATTCAACTTTAAGATCTGTAGTCATCCCATCTAAGATGACTCCTTTGTATACTTTGTTGGAGAAAAACGACAAAAAAGATCTCCTACTCAACCGTATGAATGATAGCATGCAATCATCGTCTGCTGGTCAGAAGAAGAGAGAAAGAGCAAGTTCAACATACATGGATGATATTGGGTTAGAGACACCAAAGAATAGCGTGCCTCTGACTCATATGCAAAATTTTGTCAACGTTGCATCACCATTGTTGATACCGCCTGAAAGCACAATGTCTAGAGGAAAGTTGCGGACAAATCTCTTGTCATCGGCAGAGATCAGACATGGCTATAAAGATAATAAAAGCGAAGTTGGTTTACCTCAAAATTTTGGTTCTCCACAAAAAAGGTTAAAGATTGTGAATGTGTCGGAATTCAAAAGCAGTCCTTTGAGAGATTCGAAACAAGTTATTGAACATAACGAGCAAGTAAAGCTTGGGACAGGTCATGTTGCAGGGTCAGCGGAAAAGGAAAATATCACTAATGCAAGCCTTTCTACTACGGCTGCTGATAGGACGGATGCCTTGTTCATTGAGAGGATAGGGAAATCTAGTCCAATAATTTCCACTGAAAAAGAAATGCTGGATAGCAGAGAGATTTTTCTTAATGATGCCCGTCTTAACTCAGAAATGAAAGAGAACTCCACAACCTTATTGAAGGATGTAGAACATGAGAAGCTTCAACCTAACTTTAAGGAAAGTGAAATTGCCAAGGGAGAGGTGAAACAAGCTTCTCTGGTTTTGCATGAAGGGACAGATAAACAATCTTGTCAGAAGGAAAATGTACTGTCTCCCAGTCCTCATCGTTTATCCATCGGAGGTGTAATCTCTGACCCACAAATAGAAGCTCAAGGTGGAATGTTTGAGAAAACTGCTAGATCTCACAGCAGTCCAAATTCTGGAAAAGGTCATGTCGGCCCTGAACTCTCAACTGACAATGGGATATCGACGATTAGGCACAATCTTAAAAAACCGACTGAGATAAGTGCAATGGTCTCTAAAGAAATGAGTGAACTTCAATCTCAATCAGTTGATAAGTTCAGTTTGCATTCGATTGATCGTTTGGCAGACATTGTGGAGCAGCTTCAGAGGTCAAAAACATACGAGCTTCTTTCTGAAGAAATTCAGCCTCAGGAAAGTGTAGATGCCAGTAAGTATATTCGGCATAAAAGAGCCTCAGAAATGAAACTGCTCTTGTGCCGATTTGTGCATGAGAAAGCAAAGTTGCAGCTACTGCATGTGAAGCGGGAGAGGTTATTGAGAAGGGGAAAATCACTTGCTTCTGGAATATTGGAGTCTGAAAGGTTGAATATTCCACCACAACAATCTCTAGGTGTTCGTAGCGAGTCCTTGTCAGTCAATATGAAGGACCTTCAAGAGCTTTGGGTCGTTGAAAATCTCGAGAGTAGGAACGGTTGCCACAGTGTTGTTCTCAATTACCTCAACCTAATGACTCAAAGGTTTACAGTCACTGCTCTTCCAGTCCCAAGCATTTCCATTTCGCATGTTTTAAATGACGAAAACATCAGTAAGACTTTCAAAGATATGGATGCTTTCACTGCATTTAGATTCGTATTCGATACTGAAATAACACAGAAGCAAGTTCGTGCTACAAGCTTGGCAGAAGAAACTCAAAGGACTGGTTCTTGTTTTGGCAATTTGTTAGATGTGGTGACCGAGATACAACTAGCAAGAATAGAGCTTAAAAACCTGATTTCTACAAGATTTTGCACACCCTCAGCTGAACAACTTGCACTGGAGCTTTGTTTCTTCGATTCAAAATACCGCCGGAAGGCAACAATTGACATTGCAATCAATGGGACCCATAGTTCTGAATCAGTCAAGATTGAGATAGCAGCTGCATTGCAAGATCTTAAAGCGGGGCATTCAAGGATTCAACAGCTTTGTAGGTGCGTTTCCAAGTTACTCGGCTCTTCAATCAGATATTTGGGATTTTGGAGTTTAAGAGCTTCTAGTGAGAAGAAAGAATAA 3510 41.99 MASPLPVDDNSNTKSEEGTVAFHKKRARRVSFAENTSVHIFDRDEDSGTPLDPKPPNSPSDNLGSAERDNEPNQLFWNVEEDDNDNNNEDDDMDEPGSRSPFLRLAGSPSSGGSTIGSANSNDEDNFFGPVSANFIRRDLLDSAGSDANHDQTMDSTAFSMHFRSIARSESEVELKTSTGVHLSFEEKTATQDSVPTNTGTPMLMTLAKKQNYQPSVSTSKKNTSAESNDMSIVGEYHHKYDYGELSPTLDALLAEGNMDVHVIAPSSGSILKSPRNTETTKEDGANFMDFSRDEDKEGNITHEMVNEVVSLEHNGLGVANDGSKYSPSKQIALGVSSYTTDAEISKSMLASSSILIKSSLDFSATNQDRDPKNTVYLDDGIRKEQKSPFVGPVNSLTDKPSHMLLHGVNPYKSPSVMTPHSHSSFFVRPEIPKHGGSVASIQKSISKLGMLEASPFSAALNAKLEDSTLRSVVIPSKMTPLYTLLEKNDKKDLLLNRMNDSMQSSSAGQKKRERASSTYMDDIGLETPKNSVPLTHMQNFVNVASPLLIPPESTMSRGKLRTNLLSSAEIRHGYKDNKSEVGLPQNFGSPQKRLKIVNVSEFKSSPLRDSKQVIEHNEQVKLGTGHVAGSAEKENITNASLSTTAADRTDALFIERIGKSSPIISTEKEMLDSREIFLNDARLNSEMKENSTTLLKDVEHEKLQPNFKESEIAKGEVKQASLVLHEGTDKQSCQKENVLSPSPHRLSIGGVISDPQIEAQGGMFEKTARSHSSPNSGKGHVGPELSTDNGISTIRHNLKKPTEISAMVSKEMSELQSQSVDKFSLHSIDRLADIVEQLQRSKTYELLSEEIQPQESVDASKYIRHKRASEMKLLLCRFVHEKAKLQLLHVKRERLLRRGKSLASGILESERLNIPPQQSLGVRSESLSVNMKDLQELWVVENLESRNGCHSVVLNYLNLMTQRFTVTALPVPSISISHVLNDENISKTFKDMDAFTAFRFVFDTEITQKQVRATSLAEETQRTGSCFGNLLDVVTEIQLARIELKNLISTRFCTPSAEQLALELCFFDSKYRRKATIDIAINGTHSSESVKIEIAAALQDLKAGHSRIQQLCRCVSKLLGSSIRYLGFWSLRASSEKKE 1140
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00652 1140 MobiDBLite consensus disorder prediction 18 50 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 767 792 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 58 75 - -
Cati3g00652 1140 PANTHER OS06G0608100 PROTEIN 8 920 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 1 125 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 728 742 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 765 792 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 728 752 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 1 17 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 104 125 - -
Cati3g00652 1140 MobiDBLite consensus disorder prediction 76 92 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00652 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35582 Cati3g00652 Cati7g03141
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:7170095 Cati7g03141 Cati-Chr7:67825054 dispersed
Cati Cati-Chr3:7170095 Cati3g00652 Cati-Chr3:7170095 tandem