Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00663	GCATTCTTCATCTTTTCTCCAGACTCCAGCTTCTTCTTTTTTCATCACAATTTATTTTAAAATATTTTTAAGCATTAACTTAACAATTAAAAAAAAATTATTATACAAATAAATTTCTTTTTTCACAAATCCTATTATTTAAATTGAATATATTATATTTATAAAAAATCAATGTATAGATCTGGTCGTTTGTTTATAAAAATTACTAATTATTAATTATTTTTATTAATTTATATATCTATCAACCTTTTTAGGTCGTCTCTTTCGAAAGGAACCCTAATTGCAGAAATGAGTTCTGGAATTCAGACACTCAGCAACACCACCTGTATCGACTCATGGTCAAAGGGAAGAAGAACTCCATTAGAGCCATTCCCTTCTTCTCCTTACTTCTCTGACCTCATACCTCTTCAACGACGTCGTAGTGCACTCACACTTGCTGTTTCTGTTCCAAGAGGACTTGGCACTGGTTTAATACAATCCTCTTCCAATCCACGGTCCACGTTTATGGTGCATGGGATGAAGACTGCTACTCTATCCGGTGATCCCCTTGTTGTTGTAGTTGATGATGAACTCAAAAGTAAAGAGTGGGAAATTGGGGTTCTTAAGGATGAAATAGCTGCTATGCAGGGGATTAGGATAAGAAGAACACCACCAATTGGGCCTCCTGCTAACTATGTTGGTACCTTTGAGGATTTAAAGTATGAAGATACTACTCCTCGTAACAAACTAGAGGAGATTGTGTGGACCAAATACGAAGAGGTTACCGAGATGAAGGAGAAAATTGCATTATCTTCACTAAAGAATGCTCTCGGTAATGCTCCTCCTCCGAGAGACTTTGTAGGATCTCTTAAGGAGTCGTATTTACGAACGGGGTTACCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCACCTAGTAGGGGAGTTCTAAGGGAAAATTTTAATCCTGTTGAAGTTGCAAAAGCTTACGAGAAGGGTGGAGCAGCATGCCTAAGTGTTTTGACAGATGTAAAATATTTTCAGGGAAGCTTTGAAAATCTAGAGGCTATACGGAATGCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGAATTCATTGTGGATCCATGGCAACTCTACTATGCTCGAACAAAGGGCGCCGATGCTGTTCTTTTGATTGCCGCTGTTTTACCAGATATTGACATCAAATATATGCTTAAGATATGCAAAAAGATCGGACTGGCAGCACTTGTTGAGGTACATGATGAGAATGAAATGGATCGCATGCTTGCAATTGATGGAATTGAACTTATTGGCATTAATAATCGAACATTCAAAGTCGATATCAGTAACACAAAGAAGTTGCTTGAAGGTGAGCGTGGAGAGAAGCTCCGGCAGAAAAACATAATAGTGGTTGGGGAGTCTGGACTGTTCACTCCTGCTGACATTGCCTATGTACAAGAAGCTGGCGTGAAAGCCAATGCAAAAGGTAGCTTAGGTGATCTTGTTCATCGCTATATTACATCAGATGGATTTTCACCCGAGTATCTGTTGGACTGCCTTGACTTATTCTTAGAGCATCAAGCTCTGGACCGTGTGGAGGCCTCAATCTACAAATGGCGAGGAAAAAACAATGGGATGCCTGTAAACGTTCCGATAAGGGAAATGCAGCGGATAGAGCTGAGAGTCTCTTGCTTTGCTTCAGACAGAGGTTCCATGCCCTTCCTCAAACCACCTAAATTCCATTATAACAAGACTCCGGAGCCGCAGTGCATGTTTGCGACATCTAGGAATACCGTTCAA	1776	39.86	MSSGIQTLSNTTCIDSWSKGRRTPLEPFPSSPYFSDLIPLQRRRSALTLAVSVPRGLGTGLIQSSSNPRSTFMVHGMKTATLSGDPLVVVVDDELKSKEWEIGVLKDEIAAMQGIRIRRTPPIGPPANYVGTFEDLKYEDTTPRNKLEEIVWTKYEEVTEMKEKIALSSLKNALGNAPPPRDFVGSLKESYLRTGLPGLIAEVKKASPSRGVLRENFNPVEVAKAYEKGGAACLSVLTDVKYFQGSFENLEAIRNAGVKCPLLCKEFIVDPWQLYYARTKGADAVLLIAAVLPDIDIKYMLKICKKIGLAALVEVHDENEMDRMLAIDGIELIGINNRTFKVDISNTKKLLEGERGEKLRQKNIIVVGESGLFTPADIAYVQEAGVKANAKGSLGDLVHRYITSDGFSPEYLLDCLDLFLEHQALDRVEASIYKWRGKNNGMPVNVPIREMQRIELRVSCFASDRGSMPFLKPPKFHYNKTPEPQCMFATSRNTVQ	496

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00663	496	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	92	392	IPR045186	GO:0000162(PANTHER)\|GO:0004425(InterPro)\|GO:0004425(PANTHER)\|GO:0004640(PANTHER)
	Cati3g00663	496	SUPERFAMILY	Ribulose-phoshate binding barrel	154	388	IPR011060	-
	Cati3g00663	496	CDD	IGPS	187	388	IPR013798	GO:0004425(InterPro)
	Cati3g00663	496	Pfam	Indole-3-glycerol phosphate synthase	147	388	IPR013798	GO:0004425(InterPro)
	Cati3g00663	496	Gene3D	Aldolase class I	139	393	IPR013785	-
	Cati3g00663	496	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	386	440	IPR005512	GO:0005085(InterPro)
	Cati3g00663	496	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	199	217	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00663	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35592	Cati3g00663	Cati5g01436

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:7319829	Cati5g01436	Cati-Chr5:17357626	dispersed
	Cati	Cati-Chr3:7319829	Cati3g00665	Cati-Chr3:7326165	proximal
	Cati	Cati-Chr3:7319829	Cati3g00664	Cati-Chr3:7319829	tandem