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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00671 ATGTCGAATACAGTTCATGTCTCTTTCGTTGTAATTAAGGCCGAAAACGCATGGCATTTTTCCGAAGATGGTCTTGATCTTCAGATAACAGGCCCATCCGGAGAGATTGTATACGTCGTACATGATAAAACAAGCGACAAGCACGAGTTTCATGCTCAAAAGAAAGTAAATGAGAATATGGGAAGGAGAGCAGTCCACAAGGCGCTGATCGAATCAGCAGCACTGGTCGGGGCTAGCGTCCTGCAGGTTTATCTTCTGCAACGCCTTTTTGAGCGAAAGCTTGGGACCTCGAGAGTTTGA 300 46.0 MSNTVHVSFVVIKAENAWHFSEDGLDLQITGPSGEIVYVVHDKTSDKHEFHAQKKVNENMGRRAVHKALIESAALVGASVLQVYLLQRLFERKLGTSRV 99
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00671 99 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 55 IPR015720 GO:0005783(PANTHER)|GO:0005793(PANTHER)|GO:0005794(PANTHER)|GO:0006886(PANTHER)|GO:0006888(PANTHER)|GO:0007030(PANTHER)|GO:0030134(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00671 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35593 Cati3g00671 Cati7g03126
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:7351275 Cati9g02114 Cati-Chr9:23417240 dispersed
Cati Cati-Chr3:7351275 Cati7g03126 Cati-Chr7:67720814 wgd