Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00688	ATGAAGACATTATCCGCCCTCCCCATTTCCTTATTCATACTCATATCCCTCTCCACCACCACCACCACCGCCCACAACATCACCCACATCCTCGCCAAAAACCCAGAATTCTCCACCTTCAACCATTACCTAACCCTCACCCACCTCGCCGGAGAAATCAACCGCCGCCAGACCATCACCGTCTGCGCCGTCGACAACGCCGCCATGTCCGCATTGATCTCCAAAGGCCTCTCACTCGTCACCATCAAAAACGTCCTCTCCCTCCACGTCTTCGCCGACTACTTCGGCTCGAAAAAGCTCCACGAGGTCACCAAGGGCTCCACCTCCACCGCCACCATGTACCAAGCCACCGGAGAAGCCCCGGGGACCACCGGCTACGTCCACATCACCGACGTCAAGGGCGGGAAAGTCCGATTCACCCCCGAGGACAACCCCGCCCAGACCGACGTCGTTTACGTCAAGTCCATCCTGGAGATGCCGTACAACATCTCCGTCATTCAAATCAGTGAGATTCTCAATTCGCCCGAGGCCGAGGCCCCGACCTCGGCCCCGGACCTCAACCTGACCACGCTGTTGCAAAAGGACGGATGCAAGGCCTTTTACAACCTGCTGTCCACCTCGGGCGCCATCGGAACTTTCCTAAGTTCCGTTGACGGCGGCGTCACCGTGTTCTGCCCCGGGGACGCCGCCGTCGCGGCGTTCGCGCCGAGGTATAGGAACCTGACGGCGGAGGAGAAGACGTCGGTCCTGCTCTACCACGGCGTCCCGACGTACAATTCCATGGGGATGCTGAGGTCGAGCAATGGCGTGATGAACACGCTGGCGACGGATGGGGGTGACAAGTACGATTTCACGGTGAAGAACGACGGGGAGGATGTGAAGCTGAAGACGAAGGTGGTGACGGCGGCGGTGACCGGGACGGTGGTGGACGACGAGCCGGTGGCGGTTTATAAGGTCGATAAGGTTTTGCTGCCGAGGGAGGTGTTTAAGGGGGCGGTGGCGGCCGATGAGCCCGCGGCGGCTCCAAAGGGGGCGAAGAAGAAGAAGAAGGGGGATAAGGGAGATGACGATGATGATGCGGGTTCTCCGGCGTCGGAAGATGATGATGATTCCGGTGATGCGGCCGATCAGACGGCTAGCTCCGGCGAGAGGTTGGCGTCGTCGGTGGTTATGGCGGTGTGTCTATTCCTCTCGTTCATTTAA	1203	59.6	MKTLSALPISLFILISLSTTTTTAHNITHILAKNPEFSTFNHYLTLTHLAGEINRRQTITVCAVDNAAMSALISKGLSLVTIKNVLSLHVFADYFGSKKLHEVTKGSTSTATMYQATGEAPGTTGYVHITDVKGGKVRFTPEDNPAQTDVVYVKSILEMPYNISVIQISEILNSPEAEAPTSAPDLNLTTLLQKDGCKAFYNLLSTSGAIGTFLSSVDGGVTVFCPGDAAVAAFAPRYRNLTAEEKTSVLLYHGVPTYNSMGMLRSSNGVMNTLATDGGDKYDFTVKNDGEDVKLKTKVVTAAVTGTVVDDEPVAVYKVDKVLLPREVFKGAVAADEPAAAPKGAKKKKKGDKGDDDDDAGSPASEDDDDSGDAADQTASSGERLASSVVMAVCLFLSFI	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00688	400	ProSiteProfiles	FAS1-BIgH3 domain profile.	184	323	IPR000782	-
	Cati3g00688	400	PANTHER	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	4	392	IPR033254	GO:0046658(PANTHER)
	Cati3g00688	400	MobiDBLite	consensus disorder prediction	341	358	-	-
	Cati3g00688	400	MobiDBLite	consensus disorder prediction	359	374	-	-
	Cati3g00688	400	FunFam	Fasciclin-like arabinogalactan protein 2	23	165	-	-
	Cati3g00688	400	FunFam	Fasciclin-like arabinogalactan protein 10	176	326	-	-
	Cati3g00688	400	SMART	fasc-3	222	326	IPR000782	-
	Cati3g00688	400	SMART	fasc-3	60	176	IPR000782	-
	Cati3g00688	400	Pfam	Fasciclin domain	196	325	IPR000782	-
	Cati3g00688	400	Pfam	Fasciclin domain	35	152	IPR000782	-
	Cati3g00688	400	ProSiteProfiles	FAS1-BIgH3 domain profile.	24	172	IPR000782	-
	Cati3g00688	400	SUPERFAMILY	FAS1 domain	30	175	IPR036378	-
	Cati3g00688	400	Gene3D	FAS1 domain	23	160	IPR036378	-
	Cati3g00688	400	Gene3D	FAS1 domain	162	326	IPR036378	-
	Cati3g00688	400	MobiDBLite	consensus disorder prediction	340	384	-	-
	Cati3g00688	400	SUPERFAMILY	FAS1 domain	191	325	IPR036378	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00688	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35596	Cati3g00688	Cati7g03117

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:7508242	Cati9g02103	Cati-Chr9:23300335	dispersed
	Cati	Cati-Chr3:7508242	Cati7g03117	Cati-Chr7:67657588	wgd