AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00705 ATGGCGGCCGACGACGACCCGACCCTGCTCTTCCACTGCGATTACCCGATTCGTAACCACCTCTCTTTCGTCGAATTATCATCCCACGATTCTGATGATAATGAAAAGATTGTAAGAAGGATACACACACCCTTTTCGGCGTCCATGCCGGAATTCAACGTCGTTGGGTCATGTAACGGGTTGTTATGCTTATCCGATTCGCTTTATGGGGAACCCGTTTTCTTGTTCAACCCGTTTTCCATGGATTATCTGGAGCTTCCCAAATCCAGGCAGTTTCAGGAACAAGAGGTGTTATTCGGGTTCGGGTTTCACCCGGTTACAAACGAGTATAAAGTTGTCAAGATTGTGTATTACCGGACTTGGCAGACCCGGCGTCGGGTCGCCCGAAACAACCGGAATTACCCGAAATCGGAGGTCCAAATTCTCACCATTTCTAAAGAAATTGATGGTAATAAGAGTTCATGGAGGTGTCTTGGGAAAGTGCCTTACCAGCTTGATAGGCAGGCAACAGAAGCTCCTGTGGTAAATGGGAGGATCCATTGGGTGGGTCGACCCGGCCGGGTCGCCGGGGTTCCGGGTCGGGCGATCGTTTCTTTCGACCTGAAAGACGAGAAGTTCAAAGTGGTGGCGAAGCCGAATGCCGTCGTTAGCCGTGGCAACTATCACTTGGCCGTCGTAAAAGGGTGTCTAGCGGTGGTGATTTCGTGTGGGTATGGGAAGTTGGAGATTTGGGTTATGAAGGAATATGGTTGTAGAGAATCTTGGGTGAAGGAGTTTGTGATCCATGGAGCTTTTCCAGCGAAAATGGCGGCCCACGAGCACCGCCATTACGGGATGTGGAGGTGGGCTTTGGGTGGGAGGATGGTTAGGGTTTTGTGTGTTTTAAAGAATGGAGAAATCTTGATGGAATACAGAGGAGGGAGTTTGGTTAGATATGATCCTAAATGGAAAGAGTTTAAAGATGTCATCTTTTCAAGAATGCCAAAGTTGTTTCAGACAATTGTTCATGTTGGTACCCTCAATTGGGTTCATAACTCAATCTAG 1044 48.28 MAADDDPTLLFHCDYPIRNHLSFVELSSHDSDDNEKIVRRIHTPFSASMPEFNVVGSCNGLLCLSDSLYGEPVFLFNPFSMDYLELPKSRQFQEQEVLFGFGFHPVTNEYKVVKIVYYRTWQTRRRVARNNRNYPKSEVQILTISKEIDGNKSSWRCLGKVPYQLDRQATEAPVVNGRIHWVGRPGRVAGVPGRAIVSFDLKDEKFKVVAKPNAVVSRGNYHLAVVKGCLAVVISCGYGKLEIWVMKEYGCRESWVKEFVIHGAFPAKMAAHEHRHYGMWRWALGGRMVRVLCVLKNGEILMEYRGGSLVRYDPKWKEFKDVIFSRMPKLFQTIVHVGTLNWVHNSI 347
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00705 347 PANTHER OS02G0783600 PROTEIN 31 261 IPR052361 -
Cati3g00705 347 NCBIfam F-box protein interaction domain 56 271 IPR017451 -
Cati3g00705 347 Pfam F-box associated domain 175 262 IPR013187 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00705 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:7714220 Cati5g00531 Cati-Chr5:5588995 dispersed