Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00721	AAAATCAAATTCACACCTCCATCAAATCTATTTATACCCCCATCGAAAACCACGCCTTTTTGCAAAAAATCAAATCCCACATCTCCTCCATTTTAACAACATGTCTTCTTCTCTCAAACCCACTCTTGATCTTCCTCCTTCCGGTGAGATCCATGTCATCGTCGGCCCCATGTTTGCCGGCAAGACCACAGCCCTTCTTCGCAGGATCAAATCTGAAGGAACTAATGGCAGGAAAGTAGCGATGATAAAATCAAGCAAAGATAACCGATATGCGATAGATTCAGTTGTAACCCATGATGGAACCAAGTACCCATGTTTGGCTCTCCCTGATCTCTTATCTTTTAAGCAAAAACTTGGAGAAGAAGCTTATGAAAAGCTGGATGTTATTGGCATAGATGAGGCCCAATTCTTTGATGATCTCTATGACTTTTGTTGTAAAGCTGCTGACCATGATGGAAAAACTGTTATAGTTGCTGGTCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCAGTTCTTGATCTAGTACCACTTGCTGACACCATAACCAAATTAACCGCGCGATGTGAACTATGTGGCAAACGAGCCCATTTCACCTTACGGAAGACACACGAGACAAAAACCGAACTCATAGGTGGTGCGGATGTCTATATGCCCGTTTGCCGTCAGCATTATGTTAATGGACAAATCGTGATCAAAGCTGCTAGAAACATAATAGACGAATCTACCAAGCTTCAAAGCGAACAAGAGCCAGAAGCGATCTCGACAACTTTAACTTAACAACATTCCCTACTTTGTTACAACTCGATGTTTGTTCTATGGTTTCACATGTAGCATTTGATTTCCAAATTCCAATGTTGGTTGATGTAACGGTTTACTTACGTATATATAACAAGTTAAGAACTACGTTCTTGGTTTGATTTTGTTACCATTTGGCTT	940	40.64	MSSSLKPTLDLPPSGEIHVIVGPMFAGKTTALLRRIKSEGTNGRKVAMIKSSKDNRYAIDSVVTHDGTKYPCLALPDLLSFKQKLGEEAYEKLDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVAGLDGDYLRRNFGPVLDLVPLADTITKLTARCELCGKRAHFTLRKTHETKTELIGGADVYMPVCRQHYVNGQIVIKAARNIIDESTKLQSEQEPEAISTTLT	226

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00721	226	PIRSF	Tdk	13	204	IPR001267	GO:0004797(InterPro)\|GO:0005524(InterPro)
	Cati3g00721	226	FunFam	Thymidine kinase	153	195	-	-
	Cati3g00721	226	Pfam	Thymidine kinase	15	192	IPR001267	GO:0004797(InterPro)\|GO:0005524(InterPro)
	Cati3g00721	226	PANTHER	THYMIDINE KINASE	13	215	IPR001267	GO:0004797(PANTHER)\|GO:0004797(InterPro)\|GO:0005524(InterPro)\|GO:0046104(PANTHER)
	Cati3g00721	226	FunFam	Thymidine kinase	12	152	-	-
	Cati3g00721	226	SUPERFAMILY	Glucocorticoid receptor-like (DNA-binding domain)	153	195	-	-
	Cati3g00721	226	ProSitePatterns	Thymidine kinase cellular-type signature.	179	192	IPR020633	GO:0004797(InterPro)\|GO:0005524(InterPro)
	Cati3g00721	226	Gene3D	-	11	152	IPR027417	-
	Cati3g00721	226	Gene3D	-	153	194	-	-
	Cati3g00721	226	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	15	153	IPR027417	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00721	K00857	thymidine kinase [EC:2.7.1.21]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:7844114	Cati7g02432	Cati-Chr7:48988252	dispersed