AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00725 CCTAAAATGAACCAAACACCCTCTTAGAACAAATGCTTAAATGAAAAAGCACAGGATTGTGTGTGTAAACAAACAAACAAACTCTAGTGTTTAAAATGTAACCATTTGAATACTATAGGGACGAATAAGGGATGGTTTAAATAATTATGTGGCTATTGTGTAAATCTGAAAGATCCATATATAAAAGGGGGAAAATGGAAACAGAATGATCATCTTCTTCTTCCTCACTGCAAGTCCAGATCTTCCCCGCCGGCCCCTTTGTCGTCGGTTGATTCCTCTGCTCCGGCGACAAAAATCATCATCTACATCTACTGCCGATCTCAACTGAAGCCTCTTAATCGATCTGGTGCTGATCATTTTGAATCCAAGAGAATCGTTTTTGTGACTGTCGGTACAACATCTTTCGATTCTCTTGTTAGAGCTGTTGACACTGACCAGGTTAAGGAAGAGTTGTCAAAGAAAGGATACACGCATCTCATCATTCAGATGGGCCGTGGATCCTACATGCCTAACAAGTCTAGCGGTGAAGATGGATCGTTGGTTGTAGATTACTTTACTTTTTCCTCAAGCATTGCAGACTATTTGAGATCAGCATCTCTTGTCATAAGCCACGCAGGTTCTGGGAGCATATTTGAGACGCTAAAGCTGGGCAAACCTTTAATAGTGGTAGTGAATGAAGACCTGATGGATAACCATCAAAGTGAGCTAGCTGAAGAACTAGCAGAGAGGAAGCATTTGTTTTGTGGTCGCCCTCAAACGCTCTACCAGGTCATTGAAGCACTAGATTTGGATTCTATTGTACCATACCAGTCAGGTGATGCTACTCCGGTTGTTAAACTAATCAATAGGTATCTAGGTTTTCCTTCTGATTGATCAGAATCTGTAGATATGTTATACTCATTTACTGAATTCTCTGTACATCTTTTTTGTAAGCAAATATCTTAAAGAGTTATGAATTCTCTCCATGAGATTGCATTATGAAATTTTTTCGGGTATGCTAGCAAACATGAGTTTATATCTATATTTGCTTGTAACATATATAGATATAATTCCTTCTAATCTGATATGAACCTGAGCCGTGAATCCCAAATCCCAATTGCAAAGTTGCCGAGTATCATAGATTTTATCTTTCCAGAGACGAGTTCTTTTCCCCCCCTTTTTTCTGATAGAGCAGAGTTTTACAATCTTGGTTCAAGATTTGGTTTCTTGAAATCATTCATGGCGATCCTTTTGTTAATCTTCAAATTTTGACTCTCTACCTCATCACTTCTGTTTTTAAAGACTTTCCTAATTGGTACCTTGTTTTTACGACTTTTTGAAGAAATTTCATTTTTATTTAACAAACTACGGTGAGAAGCTATGAAGATACTTTGTGGTAGAATTGAAATTGCTCTTCCTGAACGTTGGGGATTATCTGTTGACCTTAACAAAACGAGTACACTAAACAATATTGCGTTGAAAGTCAAGAATTGACATTGTATACTGAGTTCCTATCTAGGTTTATTTCTTTCTATCCCAATAAGAAATCGAGCTCCCCCGTTGATTGAAGATTTTGCTGGGAAACAGCGTGCATTTGAGGGATATCATCCAAAACCAAGCTCCCAGCTTGCCATACTTGGTTAACAAGGGACCCACCTGCAAACGGTCCCACAACAGCATAAATGGTAATCTCGTTATTTGAGTACTCAGCAGATAGACCCGAAACTTTAAAGCTAAGATCTCCAGGCATCATTGATGGGCTGTAAGTTGTTATCACTGTTGGATATACTGCCATGCTCCCATTACTATTGCGGAAAGCCACCAGTGCTTCCGACCCAACCATACCTATCTGGTTCGGGTTGATGGCCCAAGCAACCCATCCAGACGAGCCTTGTCTCGCTCTGTATGCGATCTCGGCTTTGCCCGTGGATGCGTTGTAGGTCCAATGGAGATGGGCAGATAGATGGGGAAGATCTTGGCAAGAACTGTAGACTCTTCTAGCCGTGAATCTGTGATTTGAACACATTCTTGCAGGTGATATGTTGAAATTAGATGCAAGAATGTAAAAAAATAGGATGAGGCCAGAGCTTATGGTTATAGCCATTGATGGTAATAAAAAAAAGGTAAGGTTATTGATGTTGTTAAAATGTAGTTGTCACTTGTTACTTATATGGTTAGTAAATGCATGTAGGATTGTCATGAAACTTTTGTTTCTTTTCCCCCATCCAGTGGCATTTATCACAGGTGTATCATGTGTGATGAACCAACTTCTTTCTTGCATCAAGACATCTTTACAGGTTGAAGAGATCAATCAGTGTGTGTTTGAGGGTGTAAATGTGTGAAAAGTTGTAGAACTCGTTGACTCTGTCCCCCAAAAGTCAACTTTATAGGTTCTTTTTTTTTCCGGGGCATAATCTTGAAGTTTTCTATCACAAGAAGCACTTCTAATCCAATTCTTCTACTCTTTTTCAGGTTGGCAGTATGATTATAATTGTCGTATTCGAAAAGCAACAAAAGGTACAAGATCCAATGCAATCTTCGAACTTCAATGGAACTTCTGTTGATTTCTTTAGCATGATCACATATTCACATGTGCATTGATTCAATCATTGAACACCATCTTGGTTCTGTAACAACTTGCATAATACTCTAACATCAGTGTCACTGTGTGTTTGAGGGTGTAAATGTGTGAGAACTTATAGATCTTTTTTATTGCTTCAACTCCATTTTTACAGACTTGATGAAAAATCAATGACCCCTGTGGATTGAAGATTTTCCAGCTCCATTGCATGCATTTGAGGGACACCATTCCGATCCAAGCTCCCAACTTGCCACACTTGATTTACCACAGGTCCGTTTGCAAGCGGACCCACAATCGCAAAAATGGTGATCTCGTTGTTTGCATACTCTGCCGAGAGCTTAGAAACACGGAACTGAAGTTTCCTTGGCCGCAGTGACGGGTTGTATCCAGTGATCAATGTTGTATATGCCGACATCCTGCCATTACTGTTGCGAAAAGCCAGCAGGGCCTGCGATCCAACCATGGCTCGTCGGTTCGGGTTGATTGCCCATGCGGTCCATCCATCGGGGCTGTGTGGGGCTCGGAACGCGATCTTGGCTTGTTTGGAGGATTTGAAATAGGTCCAGTGGAGATGGGCATTGAGATATGGAAGATCTTGGCAAGAAGTGAAGACCCTTTTGGATGTAAAAGTGTGGTTTGAACAGGTTTTAGCAGATGAAGTGAAGAAAAAGGAAACAAGAATGATGGAGATGAGTATAATGGATGTAGAGCTTGGAACCATGGTCATTTTCTTGATGGTATTTTCTTAAGAGTTTTAAGGTGATTTGAGGTTGTTCTGATTTAATGTGGAGAGAGGATAGATCTGTAATTTCACTCAAGTAGTGGGACTGGGAATAGCACATGGGGGTGTTACCCTTTTTCAAAATAAAGTAGCTTTTTTGACGTTTGCATTAACTTGTGGAAAAATTATATAAACAATTAAAACATTTTCATATCTATAAGATGGAATTGCACTGAAGGTTCATGTGATTAGTGCGAAATT 3542 39.81 MGRGSYMPNKSSGEDGSLVVDYFTFSSSIADYLRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQSELAEELAERKHLFCGRPQTLYQVIEALDLDSIVPYQSGDATPVVKLINRYLGFPSD 128
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00725 128 PANTHER UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13 1 127 IPR052474 GO:0006488(PANTHER)|GO:0043541(PANTHER)
Cati3g00725 128 SUPERFAMILY UDP-Glycosyltransferase-glycogen phosphorylase 20 85 - -
Cati3g00725 128 Gene3D Glycogen Phosphorylase B; 4 123 - -
Cati3g00725 128 Pfam Glycosyltransferase family 28 C-terminal domain 2 112 IPR007235 GO:0016758(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00725 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:7861371 Cati3g00725 Cati-Chr3:7861371 tandem