AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00758 | AAACAACAACAAATCACATAGACAAAAATTGCAATTTACTCTTTAAAAAATGAACAAAAGTAGACCATATGCACTTGTTCTTTCTGAAACAAATGTATGGGGTGTCTTTATTCTTCCCTTTTCTTTTCTGATATAACTAAAACAACCTGATCATTGAGTTCGATCAATTATAGAGATGGGTCTCACCGGTGAACTCGTCAGGAGTGTCTTCTCCAAGAATCGATCCTTCGGAACCGCCCACGATACCAATGTGATGAGAAGCAATGCAGTTGAAAGAAAGAGATGGGCTTCTGTCAGATCATATCTTTGTGGTGATGAATTTGGTTTCAATTCGGTTTTAGCCGAAGAAGATTCGGCTTCTAGAAGGAGCTCGAAAGCGGTTTTAGTAGGAGACTATGATTCTAGTTCTCCTAGAAGTTCTAAAGCCACTGTTTTCAGTTCCAGAATTGATGATGAGGGTTCTGAGGCCACTGTCACACAACCCATTTCGGATGACTCGAATGAAGCTCCGGAAGCCGAGGAAAAGACCGGGCTGGCCTCCGAACATGATGCCGCAGTTATCATTCAGTCGGCATTTAGAAGATTTCTGATCAATCGTCGAAACAAAAGAGTTGAATCGATCAATGGCGGTGATCTCGAGTTTGTTCCCTCAAGTAAGGAGTCTATAGCAACATCGGTAGAAGTCCAAACCGGAAACTCGGTGGTGGAAGCCAATGAGGGTGTCGATGGTTTCGCTAATCGTCTGCAACATCACAAGGGTGCCAGATCACATGGGTCGAAACTAAAGGAAGATTGGGATGATAGTACTGTGAGTAGCAACATATCGAAAATGAGGATTCAGAATCGACTAGAGGCGTCTACTAGACGCGAAAGGGCACTCGCCTACGCTTTCTCGCAACAGCTGAGGATCTGCTCAAAGAAGAAACAAAGTGTGAGATCCGGGAACGATTCAGAAGCGAACATGAGTTGGAGTTGGCTCGAGAGATGGATGGCCACCCGACAACACGATACTTCATTCGGGGATATAAGCAAACAATTCGAACAACTAAACGGGAATCAGAAACTGATGGTGAAATCGCGAGTGTTATCAGATCTAGCCGGGGAAGAGAAGGAAAGCTGTGGATCGAATGAAGTCTCGATGCATTTCGATACCGTTTCTTTGAGCTCGAAAACGGCCGAGAAATCGTACTATAAACCTGCCCGCAACCGGCTCAAGGCCACAAACGTCTCGAGGCGAAAGAACAAGGAGTACTCTAAGATGAAGAAGCAAGGAGGAGGAGGTGGAGAAATTAGATGTGAAGGGTAACTATGTTTTTACCTTTTACTAGTTTTAACCAATAATGTTTACTGCTTTGACTCTGTTAATGGTATGTGTGGTAAATATGTAATTAAGTTCCAAGTTTTATTTAGAGTATCTAGAATGGAAGGATATTATAAGTAAAGTGTGTAGTTTTCTGCCATTATTATAGTAGAGAGTTTTTATAATACTTATTTGTGTATAAGATATTTGGTTCTTATCTGATTATTGTGTTAAATAGTAGTTTCTCTATACATCTTCTGATT | 1563 | 41.59 | MGLTGELVRSVFSKNRSFGTAHDTNVMRSNAVERKRWASVRSYLCGDEFGFNSVLAEEDSASRRSSKAVLVGDYDSSSPRSSKATVFSSRIDDEGSEATVTQPISDDSNEAPEAEEKTGLASEHDAAVIIQSAFRRFLINRRNKRVESINGGDLEFVPSSKESIATSVEVQTGNSVVEANEGVDGFANRLQHHKGARSHGSKLKEDWDDSTVSSNISKMRIQNRLEASTRRERALAYAFSQQLRICSKKKQSVRSGNDSEANMSWSWLERWMATRQHDTSFGDISKQFEQLNGNQKLMVKSRVLSDLAGEEKESCGSNEVSMHFDTVSLSSKTAEKSYYKPARNRLKATNVSRRKNKEYSKMKKQGGGGGEIRCEG | 376 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00758 | 376 | PANTHER | IQ-DOMAIN 5-RELATED | 194 | 330 | - | - | |
| Cati3g00758 | 376 | MobiDBLite | consensus disorder prediction | 344 | 376 | - | - | |
| Cati3g00758 | 376 | MobiDBLite | consensus disorder prediction | 351 | 376 | - | - | |
| Cati3g00758 | 376 | MobiDBLite | consensus disorder prediction | 66 | 121 | - | - | |
| Cati3g00758 | 376 | ProSiteProfiles | IQ motif profile. | 123 | 152 | - | - | |
| Cati3g00758 | 376 | MobiDBLite | consensus disorder prediction | 71 | 108 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00758 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:8324172 | Cati5g01570 | Cati-Chr5:19326932 | dispersed | |
| Cati | Cati-Chr3:8324172 | Cati8g00916 | Cati-Chr8:7313539 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cati10g01400 | . | 107 | 288 | IQD Protein family | AT4G14750 | 33.333 | 2.54e-16 | 76.6 | |
| Cati10g02582 | ACH | 71 | 273 | IQD Protein family | AT3G09710 | 43.478 | 2.41e-48 | 172.0 | |
| Cati11g00827 | ACH | 6 | 576 | IQD Protein family | AT1G74690 | 39.932 | 8.18e-89 | 282.0 | |
| Cati11g00828 | ACH | 102 | 576 | IQD Protein family | AT1G74690 | 42.449 | 4.10e-88 | 281.0 | |
| Cati11g01335 | . | 1 | 312 | IQD Protein family | AT3G22190 | 59.159 | 2.68e-103 | 309.0 | |
| Cati11g01774 | . | 1 | 413 | IQD Protein family | AT2G26180 | 60.09 | 2.34e-148 | 427.0 | |
| Cati11g02561 | ACH | 1 | 457 | IQD Protein family | AT5G03040 | 49.576 | 1.39e-122 | 362.0 | |
| Cati11g02562 | ACH | 20 | 457 | IQD Protein family | AT5G03040 | 49.554 | 7.79e-113 | 337.0 | |
| Cati11g02563 | ACH | 20 | 457 | IQD Protein family | AT5G03040 | 46.429 | 2.66e-98 | 298.0 | |
| Cati11g03145 | ACH | 1 | 481 | IQD Protein family | AT4G23060 | 40.421 | 2.17e-61 | 205.0 | |
| Cati11g03146 | . | 1 | 481 | IQD Protein family | AT4G23060 | 41.865 | 5.10e-66 | 217.0 | |
| Cati11g03575 | . | 1 | 517 | IQD Protein family | AT3G59690 | 39.065 | 1.22e-84 | 265.0 | |
| Cati11g03576 | ACH | 1 | 517 | IQD Protein family | AT3G59690 | 39.065 | 1.22e-84 | 265.0 | |
| Cati12g00844 | . | 1 | 374 | IQD Protein family | AT4G14750 | 32.57 | 5.98e-32 | 122.0 | |
| Cati12g02647 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 47.312 | 6.42e-60 | 196.0 | |
| Cati1g00169 | ACH | 1 | 569 | IQD Protein family | AT1G74690 | 37.241 | 2.47e-62 | 211.0 | |
| Cati1g00170 | ACH | 1 | 569 | IQD Protein family | AT1G74690 | 37.241 | 2.47e-62 | 211.0 | |
| Cati1g01539 | ACH | 1 | 238 | IQD Protein family | AT3G15050 | 50.209 | 1.25e-70 | 216.0 | |
| Cati2g00422 | . | 11 | 534 | IQD Protein family | AT4G00820 | 37.056 | 3.99e-73 | 241.0 | |
| Cati3g00426 | ACH | 37 | 254 | IQD Protein family | AT3G15050 | 37.719 | 1.11e-42 | 143.0 | |
| Cati3g00758 | . | 1 | 399 | IQD Protein family | AT5G35670 | 43.584 | 9.83e-78 | 244.0 | |
| Cati3g01727 | . | 1 | 374 | IQD Protein family | AT4G14750 | 31.266 | 1.25e-29 | 115.0 | |
| Cati3g01898 | . | 5 | 100 | IQD Protein family | AT3G51380 | 50.388 | 1.02e-29 | 102.0 | |
| Cati3g03607 | . | 1 | 374 | IQD Protein family | AT4G10640 | 30.469 | 4.92e-31 | 118.0 | |
| Cati3g03783 | ACH | 1 | 480 | IQD Protein family | AT4G23060 | 33.074 | 5.49e-49 | 172.0 | |
| Cati4g01876 | ACH | 1 | 236 | IQD Protein family | AT3G15050 | 47.39 | 1.32e-64 | 202.0 | |
| Cati4g02636 | . | 113 | 443 | IQD Protein family | AT5G13460 | 48.503 | 2.06e-87 | 269.0 | |
| Cati4g02637 | . | 113 | 443 | IQD Protein family | AT5G13460 | 48.503 | 2.06e-87 | 269.0 | |
| Cati5g00293 | ACH | 1 | 332 | IQD Protein family | AT3G16490 | 41.493 | 1.99e-47 | 163.0 | |
| Cati5g01570 | ACH | 65 | 255 | IQD Protein family | AT3G15050 | 50.262 | 2.92e-61 | 190.0 | |
| Cati5g01782 | . | 1 | 353 | IQD Protein family | AT3G16490 | 50.123 | 2.78e-92 | 281.0 | |
| Cati6g00432 | ACH | 1 | 224 | IQD Protein family | AT5G03040 | 50.209 | 2.12e-63 | 204.0 | |
| Cati6g00431 | ACH | 1 | 224 | IQD Protein family | AT5G03040 | 50.209 | 2.12e-63 | 204.0 | |
| Cati6g00433 | ACH | 1 | 224 | IQD Protein family | AT5G03040 | 50.209 | 2.12e-63 | 204.0 | |
| Cati6g01144 | ACH | 49 | 517 | IQD Protein family | AT3G59690 | 47.698 | 3.06e-134 | 400.0 | |
| Cati6g01145 | . | 430 | 507 | IQD Protein family | AT3G59690 | 41.667 | 4.08e-07 | 47.8 | |
| Cati6g01985 | . | 1 | 444 | IQD Protein family | AT3G49260 | 47.692 | 4.62e-98 | 301.0 | |
| Cati6g01986 | . | 1 | 394 | IQD Protein family | AT3G49260 | 51.629 | 6.47e-97 | 298.0 | |
| Cati6g02967 | . | 11 | 534 | IQD Protein family | AT4G00820 | 51.892 | 2.52e-145 | 426.0 | |
| Cati7g00998 | . | 204 | 794 | IQD Protein family | AT1G19870 | 39.525 | 1.74e-97 | 322.0 | |
| Cati7g01428 | ACH | 107 | 393 | IQD Protein family | AT5G03040 | 48.63 | 6.21e-77 | 248.0 | |
| Cati7g01959 | ACH | 50 | 333 | IQD Protein family | AT5G07240 | 45.092 | 4.07e-40 | 144.0 | |
| Cati7g03234 | ACH | 64 | 241 | IQD Protein family | AT3G15050 | 40.741 | 4.54e-43 | 147.0 | |
| Cati8g00034 | . | 47 | 255 | IQD Protein family | AT4G00820 | 32.258 | 9.21e-21 | 90.9 | |
| Cati8g00176 | ACH | 112 | 343 | IQD Protein family | AT5G07240 | 39.033 | 8.68e-33 | 125.0 | |
| Cati8g00916 | ACH | 1 | 450 | IQD Protein family | AT5G03040 | 47.368 | 2.82e-117 | 349.0 | |
| Cati8g01348 | ACH | 1 | 450 | IQD Protein family | AT5G03040 | 53.579 | 1.82e-146 | 424.0 | |
| Cati8g01949 | ACH | 1 | 576 | IQD Protein family | AT1G74690 | 40.301 | 4.35e-89 | 284.0 | |
| Cati8g04369 | . | 137 | 793 | IQD Protein family | AT1G19870 | 34.621 | 2.16e-89 | 295.0 | |
| Cati8g04375 | . | 456 | 658 | IQD Protein family | AT1G19870 | 30.698 | 4.21e-11 | 63.2 | |
| Cati8g04380 | . | 758 | 793 | IQD Protein family | AT1G19870 | 53.659 | 4.11e-08 | 45.1 | |
| Cati8g04386 | . | 520 | 788 | IQD Protein family | AT1G19870 | 32.492 | 1.21e-20 | 92.4 | |
| Cati9g00149 | . | 21 | 414 | IQD Protein family | AT1G72670 | 41.121 | 6.02e-72 | 240.0 | |
| Cati9g00239 | . | 1 | 353 | IQD Protein family | AT3G16490 | 53.616 | 1.99e-98 | 296.0 | |
| Cati9g00859 | . | 1 | 572 | IQD Protein family | AT1G18840 | 35.911 | 7.75e-76 | 246.0 |