Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00760	AACTCACCATCAAGAATCTTTCATATTCTTGCAAGAAAACAAAATCTTTTAATAAACACAATTTGAAGCTCACCCAAAAACAAAAACCAGAAAAACCGATCCACCACCATCATCGTCCCCAACCCCAAATCTTCATGTCACCAACCACCATCTATCTCATCTTCATATTCTCTCTGTTCATCCCACCACACCCAGCCACCGCCGATCAATCGTTTATCTCGCTCCTCATAACCCAAAACGGCCTTGATTTCGTCAAGGATTTGCTCATATCGGAAGCCATCTCTATACTCACACCCCTTTGGCTTAACCAAATCGAAAAGACCGTTAAAATCCCTTTAATTGGTAAAGTGCACATTGTTCTTTCGGACATAAGTATCAATCGGGTCAATATCGGGTCATCATACATTAAGCCCAGTGTCACCGGTGTTTCCATCGATGGGTCGGAGGTGACGTGTCAGTTGAGTATGAAATGGCATTATTCTTATGGTAGTACTTGGCTTGCCCCAATTTCGATTTCGGATAGTGGGACTGCTTCTGTTGAGGTTAATGGAGCAGGAGTTGATTTAACACTAGGTTTGGATAATGAAGAAGGATCTTTAAAACTTTCGGCCATCAAATGTAATTGTCATATACATGATATCTCCATAGACCTAGATGGAGGAGCATCTTGGCTCTATCAAGGGATAGTGGATGTTTCGGAAGCACAAATAACGTCAGCCATAGAAAAAGCAATCACCGAGAAACTAAACACAGGAGTTTCAAAGCTTGGATCTTTTCTACGAACTCTCCCAAAACAACTTCCAGTCGATGATATTGCCGCATTAAACGTTACATTCGTTAACGCCCCTTTCTTGAGTGACAATTCATTAGGGTTCGAGATAAACGGACTATTCATAAAATCTAAGAAAGACACGCCCTCACTCCACAACGCTTTACAATCGCCTGTTTCTTGTTCAGACTCCTCAAAAATGGTCGCGATTGCACTGGACGAAGCTGTTTTCGTATCTGCAGCGGCCTTGTACTACGACGTGAATCCTAAAACCCAGCATTCGGCCGCTATGTTTATGCATTGGGTTGTGGATAAGATTCCGGAACAATCGTTTTTGAATACGGCTGGATGGAGGTTTATCGTTCCCCAGCTCTACAGAAAATACCCGAATGCTGACATGAATTTGGACATCTCGCTGTCTGAACCTCCAATTGTGCAGATATTGTGGCAGAATATTGATGCCACGGTTTATTCAGATCTGATCGTAAATGTTCTTGAAGGCGATGAGACAATACCCGTTGCTTGTATCTCATTGGAAGATAAAGATGATGCGTGTTCCCTGAGGTTGCCTTTGGTACTTGCTGGCACTGGTTCAGTTGAAGTTATCGGAAATAATCTTGCCAGTCATTTGAAACTGGATGATTTCACAATGTCGTTGAAATGGAGCAACATTGGCACCTTGCACATGTTTCTAATTCAGCCAGTGGTGTGGACGCTGATTGAAACTGTTTTCGTGCCATATGCGAATGCACGTCTTGGGAAAGGATTCCCGCTGCCAATAATCGATGGGTTTACGCTTCAAAATGCCGAAATTATGTCCTCTGATTCTAGAATCACGAATGAGCGGGAGGTACGGGTTCGACTTCAGATGCCATTCATCTGCTTCTCAGACAAATAA	1667	42.89	MSPTTIYLIFIFSLFIPPHPATADQSFISLLITQNGLDFVKDLLISEAISILTPLWLNQIEKTVKIPLIGKVHIVLSDISINRVNIGSSYIKPSVTGVSIDGSEVTCQLSMKWHYSYGSTWLAPISISDSGTASVEVNGAGVDLTLGLDNEEGSLKLSAIKCNCHIHDISIDLDGGASWLYQGIVDVSEAQITSAIEKAITEKLNTGVSKLGSFLRTLPKQLPVDDIAALNVTFVNAPFLSDNSLGFEINGLFIKSKKDTPSLHNALQSPVSCSDSSKMVAIALDEAVFVSAAALYYDVNPKTQHSAAMFMHWVVDKIPEQSFLNTAGWRFIVPQLYRKYPNADMNLDISLSEPPIVQILWQNIDATVYSDLIVNVLEGDETIPVACISLEDKDDACSLRLPLVLAGTGSVEVIGNNLASHLKLDDFTMSLKWSNIGTLHMFLIQPVVWTLIETVFVPYANARLGKGFPLPIIDGFTLQNAEIMSSDSRITNEREVRVRLQMPFICFSDK	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00760	510	PANTHER	OS06G0309200 PROTEIN	9	498	IPR045897	-
	Cati3g00760	510	Gene3D	-	35	216	-	-
	Cati3g00760	510	SMART	bpi2-2	274	502	IPR001124	GO:0008289(InterPro)
	Cati3g00760	510	PIRSF	Lipid-binding-protein	3	496	IPR030675	GO:0005615(InterPro)\|GO:0008289(InterPro)
	Cati3g00760	510	Pfam	LBP - BPI - CETP family, C-terminal domain	248	491	IPR001124	GO:0008289(InterPro)
	Cati3g00760	510	Gene3D	-	30	486	-	-
	Cati3g00760	510	Pfam	LBP - BPI - CETP family, N-terminal domain	36	211	IPR017942	GO:0008289(InterPro)
	Cati3g00760	510	SMART	bpi1-3	32	258	IPR017942	GO:0008289(InterPro)
	Cati3g00760	510	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	244	490	IPR017943	GO:0008289(InterPro)
	Cati3g00760	510	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	30	241	IPR017943	GO:0008289(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00760	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:8370261	Cati9g02043	Cati-Chr9:21999967	dispersed