AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00761 AGATTACAAACAAAACCTTTCTTAAACCCTCATTTCTTTGAAAGAAAAGAATCAAAGATAACCCACAAAAGCTATGCAATTCTCCATGGCAATCACAAACCCTGGTGGTGGGTTCCCATCTCTTCCCCCATTTCACCAACCCATCTCACACAAACACCCACCTACAATAACCCTTCAAAGACCAACAAAACCCAGCGATTCTTGCATAAAATCGGTGAACAATTCTGGGTTTTTATCAGCAATTGGGAACGCAATTGAAGAAGAGGAGTATAGGAAGGCTAGGGCTGAGGTTATTCGAAAAGGAACAGGGTTAGAAGGCTACACAATTGAGGGTATTTCAATTGGGGGTCATGAGACTTGTGTTATTGTTCCTGAATTCAAGTGTGCATTTGATATTGGAAGATGCCCAGCAAGAGCTGTTGCCATGAATTTCTTGTTTATTACTCATGCTCACCTTGATCACATTGGTGGGCTACCGATGTACGTTGCGACTCGTGGTTTGTACAGCTTGAGTCCTCCAACTGTATTTGTGCCTCCTTCCATTAAAGAAGATGTTGAAAACTTAATGGAGCTTCACAGGAAGATGGGTCAGGTGGAGTTAAATCTTGATTTGGTTGCATTGGATGTAGGAGAAACATATGAGCTACGAAACGACCTTGTTGTACGCCCGTTTAAAACTCATCACGTAATCCCAAGTCAGGGTTATGTCATTTACTCGGTTCGCAAGAAGCTAAAGAAGCAATATGCTCATTTGAAAGGAAGAGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATCACGGATATCATATTGTCCCCGGAGGTGGCATTCACCGGAGATACCAATTCCGATTTTCTACTTGATCCACGGAGTTCCGATGCCTTGAGGGCCAAAGTTCTCATAACCGAGGCGACCTTTTTGGACGAGAAATGCGACATCGAGCACGCACGAGAACATGGTCACATGCATATTGATGAGATTACCGAGCATGCTAAGTGGATTAGGAACAAAGCAATTCTCTTGACTCATTTCTCCTCTCGCTACCATATCGAGGATATTCGTCAAGCTGCAGCAAAGTTGCAGTCGAAGATTCAAGGAAAAGTGGTTCCGCTTACGGAAGGTTTTAGATCAATGTATTCGGCATAGACTATTTTTACCCCTGTGCATATGTAGAATCCTGAAGTTTGAGCAATGAAGCCATTGAATTTTCTCAAGGCAACCACCATTATAAAAGAAAGGGCAAAACCTCGTTTTTAGTTACCATTTAGTGTAACGAATTTTATTTTTTCTGTCAATAGATTTACTACGGTTCCAAAATTTCTTATTTTGTACTTATTTTGACTTATAGTATTTTAAACTACGGT 1365 41.03 MQFSMAITNPGGGFPSLPPFHQPISHKHPPTITLQRPTKPSDSCIKSVNNSGFLSAIGNAIEEEEYRKARAEVIRKGTGLEGYTIEGISIGGHETCVIVPEFKCAFDIGRCPARAVAMNFLFITHAHLDHIGGLPMYVATRGLYSLSPPTVFVPPSIKEDVENLMELHRKMGQVELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYAHLKGREIEKKKKSGVEITDIILSPEVAFTGDTNSDFLLDPRSSDALRAKVLITEATFLDEKCDIEHAREHGHMHIDEITEHAKWIRNKAILLTHFSSRYHIEDIRQAAAKLQSKIQGKVVPLTEGFRSMYSA 357
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00761 357 SUPERFAMILY Metallo-hydrolase-oxidoreductase 116 337 IPR036866 -
Cati3g00761 357 Gene3D - 83 352 IPR036866 -
Cati3g00761 357 PANTHER TRNASE Z TRZ1 38 351 - -
Cati3g00761 357 Pfam Beta-lactamase superfamily domain 117 320 IPR001279 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00761 K00784 ribonuclease Z [EC:3.1.26.11]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:8376090 Cati9g00856 Cati-Chr9:7557147 dispersed