AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00780 ATGATTACGACTGAAGGTGAAGGAAATCAAAAGTGGGGGATCTTCGATGATTTCTATGGTGGAACTGAGAAGAAAGTCGCCCCGGGTGACTTCCTCTGGGGCGACTCCCTCGGGTTAGAGCGTGGTTTACATGAGGAGATGCGACAGTTCTCGACAGTTTTATCCTTTAACCAGTTTCCAGATTGGTCATATCTTTCGGATCTTAGCCTTTTCTTGGCCCCTGATAGCAAGACGTTTTATGTATTGGTGGATAATAGGCCATGGCTGGAAGATTTGGCATCTAGGCCTGCACACCTATGGCAGCTGATGTCAAGGATGTCCCCGTTTGCGAACACAAGTGGGAAGAAGAAGGGGAGGAAGGGGAGGAAAGAGACTGCAGAGTTCGTCGACCAGAAGGTCCGTTCTAAAGCTTCAAGCCGGTCCCAAAACTTGACAAAATGGTTCTCTGTTGTTAATGCTGCAACGCTCTCAAGAAAGAGGGCCTTGCTACCTGTAAAGAAACTCAGGAGTTCCTTGCTCGCAAATAGCAAATTACACAGAACCTTGTATGGTTTCATTGTCTTTCAAGTGACATGGAAAGATGTTCGTGGTATCAATTATATGAATGAGCTTCAGACTGATACGTCTCTTGCTCTAGAAGCTAAATACATGAAGAGATGGGAATTTGATAGCATAGCTCAAGCAGCTAAAGGCATAACTTCATGGTTTCCAGGGACACCGCATGAACGAGATCTCTTGGAAGAGCATCTCAACTCTATGTTAGGAGATATGTTCCATGATGCTCCTAAAGAATTTCCGGACTGCCGCAGCACAAATGATGATGAAAAAACCTCAAATGCTGGTGCCAGGGGGGAGAATGCATCTCCCTGCAACCCTTGTCGCAATCTTGGTGAGCAACTAGAAGGTTTAGAAGACCTACAAACACCTCCTCCCACTGGACCCTATAAGAGAAGGAAACTGATACATCCTGTCGGCATTGATGTTGAGGCCAGTTTTTATACTGAAGTAGCTCATGATGAAGCTGCTTGCACACAAATGCCCTCCTCGTCTGCAACTGACTGTGATGAAACAGTTGAAGCTACCGAGTATAGGGATGTGTTGCTTTTGTTCCGATTCAACGACCATGACCTCCCCTTTGAATTGAAAGAAATAATAGTATCTGATCTGAGATTACTTACTCTATTAGAGGCTGGACTTCCATCTTGGGTGATTTTCTTTCAGTCTTACCCTGTATTTTGTCATATCTATCGTCCATGGATGTGCCCTCTAGCAAGAGCTCTATATGTGGTAATTTCCATTGTTACGGTTGTCATTGGTTTCTATGATCTGTACAAAAATGTCCCACTTCTTAAGGCAACTGCTTCCCGTTTATGTGGGCCACTTTTTGATTGGATAGAAACATGGGAGATGGTATCAAGGATTAAGTACTTGGGAACTATGCTGTTTCTACACAACTCTGAGAAGGCTGTTATGTGGTTCTTGATGATGACTCGCACTGTCCGGTCTTTTGTTTCAATTATCACACAACCTTTAGCTGGGCCGTTTCTGGATTTTCTAGAGGTTCTCCTTCCCGTTTGGAACTTATTTGTTCAGATGGGACAGTATTTTGGCTCGTTCATTTGGATTCTGATGGAAACTTCTTGGGACCTAGTGGAGAATATAACCGAGGCCGTACTGTTTCCTGTGTGGTTTACCTTGTCAGTTACCTGGACGATTGTAACAACAGTTATTTATCCTATATTTTGGTTCATCTGGGGGATACTCTATGCTCCAATTCGTCTCATTCTAGGTCTGTCCGACTTTGTTGGATATGTCTATAACAACATCTATGACTTAGTTGGAGACATATGGCTGTTTGTGAGTGGCATCTTCAAGTTAGCTTCAAGTGCTGAGGCAACTGTGAACACTTATGAGGTTTCTATCTGGCGGTCTCTTTGGAACGACCTCTTCTCCCAGGTATTTCGTGCTGTTCGGAGTATTTTAAACGGATTTGTTGCATTCTTTACAGCTTGCAATAGACATCGATTAAGCATATACAATCACTTACATGAGTTCATCCGAACAATTAATCAGCCGGCCCAGAGGTCACAACTCTTGAATTCTAGCCATGAATCACAAAGATCTGGAAGTCGTTTACCCGCAGAAGCCACGGAAAGAAAGCCGTCACGCAGGAGAAATTCAAAACAATGTTGACACGCAATTTGCAAGGCATATTTTCAGTATATAGATTTTGATCACTCACTAACCAACCAAGAATTCTTATACAAGCTGTATGTCCATATCCCATTATATATATAGGTGGATGAAGAAACCACATTCATTGATCTTTGTATGTTATTTGTTTTGTTTTCTTTCTTATAAACCGGGATTGCATTCTTTTATAGGTTTCAATGAATCCGAAGAATGTGGTTTGGAAGTTTTTATTTGCCAACGATCAGAAGGAAATGATAAGAAAATCTTATGGGCCATTTATCAAACGCTTACTAGGTAAGCACTTGCAGGTAAGAGTCATCGCCTTCACTTACCTTATCGAGTAAAAGTCTCGGTCATCAAAACAGATTGTTGGTAACTTACCACGTAAGAGTCTTTTACTTCATTCCCCAGGTAAGATTGTCGGTCCTTGCTATATCTTTTAGCGGGTAGGATTTTTGGTCTTTGTCATGCTCACTCGGTAAGTTAAGAGAGACACTGGTAAGTGCTTACCCGGCAAACATTTGGTAAGACAACCACTTAGATTAAGGGGCTGTTTACTAAATGCTTACCGAGTAAGCACTTACTGATATAATTTATCTTATTGCTTGAGCATTGCAAGGACCAAGAAGCTTGCCTTGTAAGAGACAAGGTCAAGACCTAGAGTTTTACCCGGTAGGCGCTTATCGGGTTTAAGATGCTTACCAACAATCTGTTTTTATGGCCAAGGATGTTACACGATAAGGTAAATGGAAACGAATCTTTTGCCGGTAAGCGCCTACCTGGTAAGAATATGGTAAACATTTTGTTATCAGCTGCTTGAAATCTGGAGTTGTGTTGTTTTTTCTCCTCCTTTTTTGTAATTTAGAGATATTTTGGACCAAATAAGGAGCTGTCGTTTTTCGAAGCAGATAAAGACCGATTCATATTTATTATATGCCTTTTTATAAGTTTATAGTTATTTCTTGCTCATCTTTTGAATGTAC 3176 41.62 MITTEGEGNQKWGIFDDFYGGTEKKVAPGDFLWGDSLGLERGLHEEMRQFSTVLSFNQFPDWSYLSDLSLFLAPDSKTFYVLVDNRPWLEDLASRPAHLWQLMSRMSPFANTSGKKKGRKGRKETAEFVDQKVRSKASSRSQNLTKWFSVVNAATLSRKRALLPVKKLRSSLLANSKLHRTLYGFIVFQVTWKDVRGINYMNELQTDTSLALEAKYMKRWEFDSIAQAAKGITSWFPGTPHERDLLEEHLNSMLGDMFHDAPKEFPDCRSTNDDEKTSNAGARGENASPCNPCRNLGEQLEGLEDLQTPPPTGPYKRRKLIHPVGIDVEASFYTEVAHDEAACTQMPSSSATDCDETVEATEYRDVLLLFRFNDHDLPFELKEIIVSDLRLLTLLEAGLPSWVIFFQSYPVFCHIYRPWMCPLARALYVVISIVTVVIGFYDLYKNVPLLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFVSIITQPLAGPFLDFLEVLLPVWNLFVQMGQYFGSFIWILMETSWDLVENITEAVLFPVWFTLSVTWTIVTTVIYPIFWFIWGILYAPIRLILGLSDFVGYVYNNIYDLVGDIWLFVSGIFKLASSAEATVNTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFTACNRHRLSIYNHLHEFIRTINQPAQRSQLLNSSHESQRSGSRLPAEATERKPSRRRNSKQC 730
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00780 730 MobiDBLite consensus disorder prediction 697 712 - -
Cati3g00780 730 MobiDBLite consensus disorder prediction 264 291 - -
Cati3g00780 730 PANTHER OS05G0597400 PROTEIN 63 721 - -
Cati3g00780 730 MobiDBLite consensus disorder prediction 264 280 - -
Cati3g00780 730 MobiDBLite consensus disorder prediction 697 730 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00780 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35609 Cati3g00780 Cati5g01490
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:8738491 Cati7g03039 Cati-Chr7:66561591 dispersed
Cati Cati-Chr3:8738491 Cati3g00780 Cati-Chr3:8738491 tandem
Cati Cati-Chr3:8738491 Cati3g00781 Cati-Chr3:8738491 tandem