Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00797 | TAGCATTATTTTTTAGCCCATTGTTTCTCTCTCTCTCTCTCTCTCTAGAATTTGATTTTTGAATTCAAAGAAAGAAAGAATAAACTTTAGGTTTTAGATAGAAACCACATAGAAACAACCTTCTTCTCCAATTGCTCTAGGGTTTCTTCTTATAATCTCTTATCACTTCTCCCATTGAATTCATCATCATCATCATCATCATCAGAGCTGGTTTTCATCATTGATTTCATGTTCTCCAGGTTCTGTTTTCTGTTTTTCTGATTTCAAGCTCTACATGATTCGATTGAAGTTGAAAACCTCCCAAATTTCAATTCATTTCTACTTTCACAGCCTGTAAGCTTACAGAGATTCTGTGTTAAAGGTACGAACTGTTATTTGTTAGGGTTTTGAAATTGATTTTGGAAATGAATGTGGTTTGTTTGGGGTATTTTGAGGTTGAAGCTTTGATTGATTGTGGAAAAAAGGAGTTTTAAGCTTGTTTTTTTTGGGGATATGATTAAGCAAATACTTAATAAGCTTCCTAGGAAGCCATCTTCCAAATCATCATCACACAATGATGAAGGAAACAGTGCAATGGATTCGGCTTCGATAAATTCGAGTGGTGTGGGTGTTAATAATGGCGGTTCTAAGAGCAATTCGGCTAAATCGAATAACGAAACTAGTAAGAAGTTGGGTTCTCTTGGGGGGAATCAAGTGGTGCAGGTATTGAATCATGCTTCTTATGAAGCATTGCCTAGTTTTCGAGTTGTATCTAGTTCGGAAAAACACAACTTATTCATTAAGAAGTTGAATATGTGCTGTGTCGTGTTCGATTTTAGCGATCCATCCAAGAATTCGAAAGAGAAGGATGTTAAGAAACAGACTTTGCTCGAGCTCGTCGATTACGTTTCCTCGGCTACCTCGAAATTCAACGAGGTTACGATGCAGGAAATGACGAAAATGGTGGCTGCTAACTTGTTTCGGGCGTTGCCTAATGCTAACCACGATAACAAGCTGCCGGATTCATATGATCAAGAAGATGATGAGTTTAGTATGGATCCATCTTGGCCACATCTTCAAGTTGTCTATGAGTTCCTTCTTAGGTTTGTAGCTTCATCAGAAACCGATGCTAAACTTGCCAAAAGATATATCGATCATGCTTTCGTGTTGAAATTGCTTGATCTCTTTGATTCTGAGGATCAGAGGGAAAGGGAGTATTTGAAGACGATCTTGCATCGTGTATATGGAAAGTTTATGGTTCATCGCCCGTTCATCAGGAGAGCGATCAACAATATCTTCTATCTTTTCATTTTTGAAACCGGGAAGCACAATGGGATTGCGGAATTGCTTGAGATTTTGGGTAGTATAATTAATGGGTTTGCTTTGCCTTTGAAGGAAGAACATAAGCAGTTCCTTGTTCATGCTTTGATCCCACTTCACAAGCCTAGATGTTTGTCGACATACCATCAGCAACTCTTGTATTGTGTTGGTCAGTTTGTCGAGAAAGATTCTAGGTTGGCGGATACCGTGATTAGGGGATTGCTGAAATATTGGCCCGTAACTAATAGCTCGAAAGAGGTGATGTATCTTAGTGAATTGGAGGAGATTCTTGAAGCTACACAGGCTGCGGAATTCGAACGGTGCATGGTCCCATTGTTCCGCCAGATCGGCTACTGCCTCAATAGTTCACATTTCCAGGTGGCAGAACGTGCGTTGTTCCTATGGAATAACGAGCATATAAGGAATCTAATAACTCAAAACCGCAAAGTGATTCTGCCCATTATCTTCGCACCTTTGGAGAAGAACACACGAGGCCACTGGAACCAAGCCGTTCAAAGCCTAACGTTTAACGTTCGCAAGATATTTTCGGACGCTGACGAACCGCTATTTCAAGAGTGCCTGGTGAAGTACAAACAAGATGAAGCCAAGGAGAAGGAAAGCCTCGCTAAGCGGCAGTCAACCTGGAGCCGCCTGGATACCATAGCTGCCGCTAAAGCTTTGAGCATCGAGTCTGTGGTCATCTCAAGCTTCGCCTCCTCTGTCACCAGCACCACCACCACCGCGGTTTCATGAACAGGTGACGGTTGAATTTATCATCACCTGCATCAATTGATTCATTGACCAAGGTTGACTTTTGCAAAGAGGCACAAGAAGTGAAGAAGTTTGGTGATTGTATCTTATTTTGTTTTTGTTTTTGGTTCATTCCTTGTGTGTTGTATGGTGATGGAGGTGTTTGTGATATAAAGTTGTTGCTTAGAAATGAGATGGGGTTGAGTCTCTATGTTAGTTGATGAATTAGTTATTGGTTTAAGAACTCCAACAGATTTTTAAAATGGAGAAGA | 2321 | 40.46 | MIKQILNKLPRKPSSKSSSHNDEGNSAMDSASINSSGVGVNNGGSKSNSAKSNNETSKKLGSLGGNQVVQVLNHASYEALPSFRVVSSSEKHNLFIKKLNMCCVVFDFSDPSKNSKEKDVKKQTLLELVDYVSSATSKFNEVTMQEMTKMVAANLFRALPNANHDNKLPDSYDQEDDEFSMDPSWPHLQVVYEFLLRFVASSETDAKLAKRYIDHAFVLKLLDLFDSEDQREREYLKTILHRVYGKFMVHRPFIRRAINNIFYLFIFETGKHNGIAELLEILGSIINGFALPLKEEHKQFLVHALIPLHKPRCLSTYHQQLLYCVGQFVEKDSRLADTVIRGLLKYWPVTNSSKEVMYLSELEEILEATQAAEFERCMVPLFRQIGYCLNSSHFQVAERALFLWNNEHIRNLITQNRKVILPIIFAPLEKNTRGHWNQAVQSLTFNVRKIFSDADEPLFQECLVKYKQDEAKEKESLAKRQSTWSRLDTIAAAKALSIESVVISSFASSVTSTTTTAVS | 519 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00797 | 519 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
| Cati3g00797 | 519 | PIRSF | PP2A-B56 | 3 | 518 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Cati3g00797 | 519 | MobiDBLite | consensus disorder prediction | 10 | 62 | - | - | |
| Cati3g00797 | 519 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 87 | 490 | - | - | |
| Cati3g00797 | 519 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 1 | 494 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Cati3g00797 | 519 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 80 | 491 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Cati3g00797 | 519 | Gene3D | - | 88 | 489 | IPR011989 | - | |
| Cati3g00797 | 519 | SUPERFAMILY | ARM repeat | 92 | 474 | IPR016024 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00797 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:9084648 | Cati8g01823 | Cati-Chr8:14989171 | dispersed | |
| Cati | Cati-Chr3:9084648 | Cati7g03043 | Cati-Chr7:66661987 | wgd |