Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00798	CCCTAAATCGAACGTTGTTTCTAAATTGGTAGAGAGAGCAATGGCGGCGAGCAACAACCAACAAGTAGTAGTAGTAGTTCATCATCAGCGACTACTCTCCATCACTGAAAACTGGATCGGATGAAATCTTCTCTAGACTTCATCCAATTCAATTCAATGGCGTCTTCTTCATCTTCATGGTGGCAGTCATTTCTCTCTCCGGCCAAGAATCCCTTCACCGCTCTCTGCTTCAAACGCCTCCAAGAATACGTCATTAAAGCCAAACTTAAGGTGATGAGATTACCAGAAGAGAAGTCATCAGCAAGTCTTGAGGAGATGGAGAAGATTATAGGGTATAAGTTCAAGAAAAAGATTCTATTGCAACAAGCCTTTACACATCCGAGTTTTCATGGCTCTGAATCCTATGAAAGACTTGAGTATGTTGGTGACTCCATTCTCAATTTTCTAATCAGTAAACAGCAATTCTTCATGTATCCTGATCTCCCACCAGGGTCGTTGACTGCCCTCCGAGCTGCCAATGTGGATACTGAGAAGCTAGCACGTGTAGCGGTTAAATATAACTTCCATAAATACATACGCCATGAAAATCCGACGCTTAGTAAGCAAATTCGAGTATTTACGAGAGCTCTTGAAAAGTATCCTCTACATTCATATGGATTAATCGATGCTCCAAAGACTTTAGCAGATGTTGTTGAATCCACAATAGGGGCCATCTACGTTGACAGCAATTCCTCAATTGATGCTACATGGGAGGTGGCTAAGATTCTACTTGAGCCCATGATCACTCCCGAAATGCTACAAAAGAACCCGGTGAGGAAGCTGAATGAACTCTGCCACAAAAAGAAACTGAAGATACGATTTAGAGATAAATGGTTAAAAGAAGGCGTGTACGAAGTTTTTATTGATAATAAACTTAGAGGAAGAGGTGAATATCAAGCCAAGAAGGAAATCGCGTTGAACAGAGCAGCCGAGGATGCATGTAACAACATCATCAACGGCCGTGATGAACATTGAGGGTAGGTAACTCGTATTCAACATTCTTTTTTGCCATTTGTACGCAATGAACAAAATTGATATTCATATCGATAATACCTCCAACTTAGTTGGAGCATGTTGTTTCTTATTCATACAGATTAACATCAGTTTTTAATACACTTCTTTTTAAGGTTTCATGAACACAAAGTCTGATTGATCTCTTTGCTATGTGCAAACTCTACTTTTGC	1223	40.23	MKSSLDFIQFNSMASSSSSWWQSFLSPAKNPFTALCFKRLQEYVIKAKLKVMRLPEEKSSASLEEMEKIIGYKFKKKILLQQAFTHPSFHGSESYERLEYVGDSILNFLISKQQFFMYPDLPPGSLTALRAANVDTEKLARVAVKYNFHKYIRHENPTLSKQIRVFTRALEKYPLHSYGLIDAPKTLADVVESTIGAIYVDSNSSIDATWEVAKILLEPMITPEMLQKNPVRKLNELCHKKKLKIRFRDKWLKEGVYEVFIDNKLRGRGEYQAKKEIALNRAAEDACNNIINGRDEH	297

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00798	297	Pfam	Double-stranded RNA binding motif	230	289	IPR014720	-
	Cati3g00798	297	CDD	RIBOc	79	226	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cati3g00798	297	ProSitePatterns	Ribonuclease III family signature.	96	104	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cati3g00798	297	SMART	riboneu5	78	226	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cati3g00798	297	Pfam	Ribonuclease III domain	96	202	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cati3g00798	297	ProSiteProfiles	Ribonuclease III family domain profile.	63	203	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cati3g00798	297	FunFam	Endoribonuclease dicer-like 1	57	224	-	-
	Cati3g00798	297	SUPERFAMILY	RNase III domain-like	62	223	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Cati3g00798	297	SUPERFAMILY	dsRNA-binding domain-like	185	290	-	-
	Cati3g00798	297	Gene3D	-	226	297	-	-
	Cati3g00798	297	PANTHER	DICER-RELATED	50	291	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Cati3g00798	297	Gene3D	Ribonuclease III domain	53	225	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00798	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35616	Cati3g00798	Cati5g01509

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:9123058	Cati3g00799	Cati-Chr3:9123058	tandem
	Cati	Cati-Chr12:72898860	Cati3g00798	Cati-Chr3:9123058	transposed
	Cati	Cati-Chr5:4898949	Cati3g00798	Cati-Chr3:9123058	transposed
	Cati	Cati-Chr8:80649900	Cati3g00798	Cati-Chr3:9123058	transposed
	Cati	Cati-Chr3:9123058	Cati5g01509	Cati-Chr5:18345380	wgd