AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00811 GTAAGACAGTGAAAAGCTGATGTGCCACCGACCGATGTGGCGATGGTCTTATAAAAAGAAAAACATAGCGCCGCGGTTGGGATTGGCCCAGATAACCGAAGGCCCATAAGCAAAGAGTATCCAAATCGCCATAAAACTCCTCCTCCTCCGACCACCGCAACCAGACCCTCCTCCGCCTGAGATTCTACAGACGGAAAATCATCGCCTTTTTTGATACACTCCGATCTCCATCAACGCCATAGACATGGACTTCGATGTTCCCACGGATCTTATCAATCGAGCTCGGATCGGGTTCCGGGAAGGCGTCGGGCTATCGTTGGAAGACACAACCCTAACCTCATTGCCAACCCTTGAGGCCTCTATATCCACCTTACACCACTCCTCCTCTCCCTCCCATTCCCATCTCAGATGCAAATTTTGTCAAGGGAAGCTCCTCAGAGGTTTACGCTCACTCATTTGCATCTACTGTGGTGAATACCAGAAGAAGGACCTCCATCCTGACCCTATCTCCTTCAATTCCACCAATGGATATCGCTGGCTACTTCAATCTCTCAGCTTAAGTGGATCGGAAAGAGTTGGGTCTTTGGCTGAAGGAAGTGGAATAGATGGAGGGCAGAGTCCTGCAAGAGATGAGGCAACTTTATCTGATCTTCTAGATTTGCAGATTTCATGGCGAGATAAGCCTAAGAAACCCGAGAATAGTTTTGACAACAAGACTTCTGAGCATGGTAGTTCTTTCAATGTTGGTACAGCCGACTTGGACGACTTCTTTATAGAGTCAAAGAGAGCAATTACCCCTAATGCATCCCAAGCACAACCAGTTACCAGCCAAAATAAGGCCTTTGAGGGTCAAGAAAATCTTACTCTTTTCCAGAATGCTTTGCCTCGTGAGACCTCTTTCGCGTCTACCCTTGATTCCAGTGCTGATGCTTCATCTGGCTGGAATGCAGAATTTCAATTTGCAGATACCACAATGGAGGATGAGAATTCCAAATCAGTTGATCCTTTTGTTGGCGCTGAAGTTGATCTGTCTGTCCACTTGGACACAGTTTTTGGACAAACGGAAGGATCGAGTAAAACAAAACTGAATGATGATTCAGATACTGTTCCTTCTACGGGTAATGACTGGATTCAACACGATCCATTTGCCAACATGAGCTCTGCATCTTTTCAGCAAGCTGAGCAGTTGGAATCAGCTGTTCAAGCAAAGGATGGGTTATCAGGTCATCCAAATAATATATCTTTAAAAGGTATTGATGGGGACTGGTTTAATGATGGTATCTGGCAGACGAGTAGTACAAACAATGTTGCTGTCGCTCAGCAGGATGATCTATTAGACTTGGTTGCCAAACATAACGAGGGATCTTCACAGAGTAATTTAAATGATTCATCTAGCAAAGGTGTTTCTCTAGATTGGTTTGAAAATACTAACTGGCCGAAAAGCACTGCCAACAACACTACTGCCAACAAAGCTGAAAGTTCATTTGGTGTTAAACCACAGGTTGATGCAGTCTCTTCCCCATCGTTGGTTAGTGTTCAAGATGACCTGCTATACAATGCTAGCTCCCAGATGTCTAGACACACTGAAAGGTCAAATTTTGATAATTCAAGCAAACACCATTCAGACACGACTGACTGGTTTCAAGATGATCAATGGGCATTTGGTGCTTCCAGTGCTACTACTATGGTGGCCAGCAAAGATGATGATGACACATTTGATGATTGGAATGATTTCACAAGCTCAACTGGTAATCAAGGTTCTTTCCGAGATTCATGGAAAGAAAGTAGTAAGGACGACGTCGCTGCTAGCGAGAAAAAATCAGAACTAAATTTGTTTTCATCTACAGCGGATCCACAGGAAGTCGATTTTGGCAACTTCTCACAGTCGGATCTATTTTCGGGTTCATCTAGTAATAAAAATCAAAATGATACACAAGAAGTGCATAATATCTTCTCAGAAGTATCTACAGCGAGCTGGAAGAATAGTAGTAATGGAGAGGAAGGAAAGAAGGAAAATGTAGAGATGGTGTTGTCACAAATGCATGATCTGTCTTTCATGCTTAAGGATGAGCTTTCACTCCCCTCCAACCCTCAAGGATCCACCTGATGATCATATCTGTGATTAGGTATTTTAGTCTTCTTCTGTATCTTACTATTATCACTTATCAATCGATCATTCCTCTTGTTGTAGTACTTGTGTACTTTTGAGCTGTAAATAGATGAGATTATGCCATTTTGGTCCATTTGATTTTGTATCCATTTCCCATTTCTTAAATTCTCTTTCAGATACAAGGTTATTGGATCTGTGTATTATTTTTTTACATGTTGTATTTGATTTGTAATCAGAAGTTATTGGGGTTGTGTGCTAACTTTTACATACAATATTACAAATCATATTAGTACGTCG 2407 42.25 MDFDVPTDLINRARIGFREGVGLSLEDTTLTSLPTLEASISTLHHSSSPSHSHLRCKFCQGKLLRGLRSLICIYCGEYQKKDLHPDPISFNSTNGYRWLLQSLSLSGSERVGSLAEGSGIDGGQSPARDEATLSDLLDLQISWRDKPKKPENSFDNKTSEHGSSFNVGTADLDDFFIESKRAITPNASQAQPVTSQNKAFEGQENLTLFQNALPRETSFASTLDSSADASSGWNAEFQFADTTMEDENSKSVDPFVGAEVDLSVHLDTVFGQTEGSSKTKLNDDSDTVPSTGNDWIQHDPFANMSSASFQQAEQLESAVQAKDGLSGHPNNISLKGIDGDWFNDGIWQTSSTNNVAVAQQDDLLDLVAKHNEGSSQSNLNDSSSKGVSLDWFENTNWPKSTANNTTANKAESSFGVKPQVDAVSSPSLVSVQDDLLYNASSQMSRHTERSNFDNSSKHHSDTTDWFQDDQWAFGASSATTMVASKDDDDTFDDWNDFTSSTGNQGSFRDSWKESSKDDVAASEKKSELNLFSSTADPQEVDFGNFSQSDLFSGSSSNKNQNDTQEVHNIFSEVSTASWKNSSNGEEGKKENVEMVLSQMHDLSFMLKDELSLPSNPQGST 620
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00811 620 PANTHER DENTIN SIALOPHOSPHOPROTEIN-RELATED 1 355 - -
Cati3g00811 620 MobiDBLite consensus disorder prediction 537 562 - -
Cati3g00811 620 MobiDBLite consensus disorder prediction 495 514 - -
Cati3g00811 620 MobiDBLite consensus disorder prediction 495 509 - -
Cati3g00811 620 MobiDBLite consensus disorder prediction 274 300 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00811 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:9324921 Cati7g03052 Cati-Chr7:66765491 dispersed
Cati Cati-Chr3:9324921 Cati7g03051 Cati-Chr7:66765491 wgd