Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00842	CTCCCATAGAAACAAGAACACTTGAGCGGCCAAGCTTTCACTCCTTACCAGATATAAAAACAACTTCTTCTTCAGCGGTCCTTCTCTATCTCTATCTCTTCCCTTATAAAATCATCATCTTTACAAATAAATTATATATATATATATATAAAGATTTTAGAAATTAGCAAAAAAATTTACAAATATGAGCCAACAGATTACCAGAAAAATATGGGGATTAAACCTCAAGAGAACCATCATCTGGCGTGTAGCTTTTCTCCGGCGATGTGCTCGGTCTCTATGGCACCAAATCCTTGCTTGTTTGATCGGAAAATCCCTCCGGTACCGTCATTTGTTAAGTTCCGGCTCCGGCACTCTGATTCCGACTTCTCTTCGTCGGCCGGAAATGACACCCTCTACCGGCGGCGAGATGACGTCATCCTCCGATGATGGTTCCGATTTGGTGGCTTTGAAGATTAGTTTGTTGGGTGATCAACATATCGGCAAAACAAGCTTCTTGGCAAGGTATGTTGGGAAAGAGAGGAATGAAGAAGAATTAGAAGGCAGAGGAATAAATCATATGGATAAAACACTGTGTGTTAGAGGAGCCAGGATCGCCTACAGTATCTGGGAAGTCGGTGGTGATGCATTTTATCCAGATGGTGATTTGAGGACTTCAATTCCAGCCGCTTGTAAAGACTCGGTAGCTATACTATTCATGTTCGATTTAACGAGTCGATGTACACTGAACAGTGTCATCAATTGGCACCAACAAGCTAGGTATCATAATCAGATGGCGATTCCGGTGATGGTCGGGAGCAAGTTTGACGAATTCGTTCAACTTCCGTTAGATTTACAATGGACGATTGCAAACCAGGCAAGAGCATATGCAAAGGCCATAAACGCAACCTTGTTCTTCTCGAGTGCATCTTACAACATAAACGTAAATAAAATCTTCAAGTTCGTAACTGCAAAGCTCTTTGACTTGCCTTGGGTTTTGGAGCGTAATCTTACAATTGGAGAGCCTATTATCGATTATTGAAGTGAGAGTTTGCTATGCATAGATTCAGACCCGCCTCCGCGTTTACGTTTGTGAACGTAAATGTGAATAGTAAAAAAGTGGTTGGGAGGAAGTGGTGGTAGAATCAATCATTGTATCTCCATTTTGTCGATTTTAGTTAAGATTTTAAGGGTTATCTTTTTTTTTTCTTGGTATTTGTTCTTTACTTGATTTTGAACATGTTGGAGAGGTTGGTGGAGGTATCGAGGCTTCCCTATCTTCATGTAAAGCTTGTCATTACACGTTAATCGATTACGTACAAGAGATCCTTCTAGAACTGATTTTGTGCCGCTTTTTATA	1339	40.63	MSQQITRKIWGLNLKRTIIWRVAFLRRCARSLWHQILACLIGKSLRYRHLLSSGSGTLIPTSLRRPEMTPSTGGEMTSSSDDGSDLVALKISLLGDQHIGKTSFLARYVGKERNEEELEGRGINHMDKTLCVRGARIAYSIWEVGGDAFYPDGDLRTSIPAACKDSVAILFMFDLTSRCTLNSVINWHQQARYHNQMAIPVMVGSKFDEFVQLPLDLQWTIANQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWVLERNLTIGEPIIDY	278

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00842	278	MobiDBLite	consensus disorder prediction	63	82	-	-
	Cati3g00842	278	Gene3D	-	77	265	IPR027417	-
	Cati3g00842	278	FunFam	Septum-promoting GTP-binding protein 1	79	268	-	-
	Cati3g00842	278	ProSiteProfiles	small GTPase Rab1 family profile.	79	278	-	-
	Cati3g00842	278	PANTHER	-	87	277	-	GO:0003924(PANTHER)\|GO:0005525(PANTHER)
	Cati3g00842	278	SMART	rab-sub-5	89	261	-	-
	Cati3g00842	278	Pfam	Ras family	90	257	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Cati3g00842	278	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	89	271	IPR027417	-
	Cati3g00842	278	PRINTS	Transforming protein P21 ras signature	89	110	-	-
	Cati3g00842	278	PRINTS	Transforming protein P21 ras signature	196	209	-	-
	Cati3g00842	278	PRINTS	Transforming protein P21 ras signature	236	258	-	-
	Cati3g00842	278	PRINTS	Transforming protein P21 ras signature	130	152	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00842	K07976	Rab family, other

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35626	Cati3g00842	Cati7g02991

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:10078234	Cati6g01474	Cati-Chr6:16457693	dispersed
	Cati	Cati-Chr3:10078234	Cati3g00843	Cati-Chr3:10078418	tandem
	Cati	Cati-Chr9:21404118	Cati3g00842	Cati-Chr3:10078234	transposed
	Cati	Cati-Chr3:10078234	Cati7g02991	Cati-Chr7:65841187	wgd