Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00869	ATGGATCACCGATTCCTTCTCCTCCTTGCGGTTTCTCTGCTCGCCGTATTCTCTTCCGTCGCCTGCGACGATGACGTCTTCATCCGTCAGGTCGTGGGCGACGGAGATCCGTCGTTGAAGGCGGCGGAGCACGGCCGCTTCGGCGCCTTCAAGCGGAAGTTTGGAAAATCATATGCTTCGCAGGAAGAGCACGATTACAGATTCTCCGTGTTCAAGGCTAACGTGCGCCGTGCAAGGCGTCACCAGAACCTTGATCCGTCGGCGGTGCACGGCGTCACTCAGTTCTCCGACATGACTTCGGCGGAGTTCCGGAAGCACCTCGGGCTGAGGCCTCGAGTCAGTACAACCGGGGCACTAGAAGGTGCAAATTTCCTTGCCACAGGGAAGCTTGAAAGCCTTAGCGAGCAGCAACTTGTTGATTGTGACCATGAGTGCGATCCAGAAGAAGAAGGATCATGTGATTCAGGATGTAGGGGAGGTCTCATGAACAGTGCCTTTGAGTACACTCTCAAAGCTGGTGGGCTTATGAGCGAAAAAGACTATCCTTACACGGGCACCGACCGTGGAAGCTGCAAATTTGATAAAAACAAGATTGTAGCATCTGTAAGCAACTTCAGTTTGGTCTCTCTAGACGAAGACCAAATTGCTGCCAATCTCGTGAAACATGGTCCTCTTGCTGTGGCTATAAATGCAGTTTACATGCAGACATATGTTGGAGGAGTGTCATGCCCATTAATATGCTCAAAGAGGTTAGACCATGGCGTACTATTGGTCGGGTATGGTGCAGCTGGGTACGCTCCGGCTAGAATGAAGGAGAAGCCATATTGGATCATCAAAAACTCTTGGGGAAAGAATTGGGGGGAGAAGGGATATTACAAGATCTGCAAGGGTCATAACGTCTGTGGTGTCGATTCCATGGTCTCCACAGTCGCTGCTGTTGACCGACACTAGTAGCACTATCGTTAAAACAGCCTACTACTAGTATATAGGAAGTGCTTAGAAACGACAAGATATCAACACTAATGGAAACGGGAATTAGCGTATGCAAACTACTAATGTGTGTTTGAGAAAACCGTATGTTGCTTAAACTTCTAACGTTTTAATACTACGATGTGTGTTTATAAGTGGTATATGATGCCGG	1141	48.82	MDHRFLLLLAVSLLAVFSSVACDDDVFIRQVVGDGDPSLKAAEHGRFGAFKRKFGKSYASQEEHDYRFSVFKANVRRARRHQNLDPSAVHGVTQFSDMTSAEFRKHLGLRPRVSTTGALEGANFLATGKLESLSEQQLVDCDHECDPEEEGSCDSGCRGGLMNSAFEYTLKAGGLMSEKDYPYTGTDRGSCKFDKNKIVASVSNFSLVSLDEDQIAANLVKHGPLAVAINAVYMQTYVGGVSCPLICSKRLDHGVLLVGYGAAGYAPARMKEKPYWIIKNSWGKNWGEKGYYKICKGHNVCGVDSMVSTVAAVDRH	316

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00869	316	SUPERFAMILY	Cysteine proteinases	46	310	IPR038765	-
	Cati3g00869	316	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	22	-	-
	Cati3g00869	316	FunFam	Cysteine protease RD19A	112	311	-	-
	Cati3g00869	316	SMART	Inhibitor-I29-2	47	103	IPR013201	-
	Cati3g00869	316	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	275	294	IPR025661	-
	Cati3g00869	316	Gene3D	Cysteine proteinases	112	311	-	-
	Cati3g00869	316	Pfam	Papain family cysteine protease	113	309	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Cati3g00869	316	ProSitePatterns	Eukaryotic thiol (cysteine) proteases histidine active site.	251	261	IPR025660	-
	Cati3g00869	316	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	57	303	IPR013128	GO:0004197(PANTHER)\|GO:0005615(PANTHER)\|GO:0005764(PANTHER)\|GO:0008234(InterPro)\|GO:0051603(PANTHER)
	Cati3g00869	316	CDD	Peptidase-C1A	114	310	IPR039417	-
	Cati3g00869	316	Pfam	Cathepsin propeptide inhibitor domain (I29)	47	103	IPR013201	-
	Cati3g00869	316	SMART	pept-c1	97	311	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Cati3g00869	316	Gene3D	-	38	110	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00869	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:10504393	Cati9g01074	Cati-Chr9:9464450	dispersed
	Cati	Cati-Chr3:10504393	Cati5g01394	Cati-Chr5:16684470	wgd