Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00888	GGTCTGCGAGTTTTCAGGTTCAGTTCGGAAGGGACAAGTAGATGGGGAAGAATAGGAAGATGAAGCTAGATGCCGCCGGTGGTGGTACTCACCACAGTCCGGCCACCGTCTTCGTCTCCAATTTGCCCTACTCTTTCTCCAACTCTCAGCTGGAAGAAACATTCAGCGATGTTGGACCAATTAGGCGCTGTTTTATGGTTACACAGAAAGGGTCGACCAAACACCGTGGCTTTGGTTTTGTTCAATTTGCTGTGACTGAAGACGCTACCCGTGCCATTGAGCTGAAAAATGGTTCTTCTGTTGGAGGTCGAACAATTGGAGTTAAACAGGCAACACATAGGGCTCCTCTTGAGCAACGACGATCTAAAGGAAATGAAGTGGTTCCATCTAATGATACCATCATGGCTAAGGACGGTGAGGATGATAAATCTATTATCACTAACAAGACGAAGGATGATAAGGATGATTCAGTGTTTCATTCTGATGATGTTACCGAGACAAAGGATGACCAGGATGATTCATCGAGACAGATAGTAGAGCATAAACCGGCTCCTGATTCTCAAGAAAAAGGCAAAGTTAAGCTGAAGAAAACAGTGACCCCCTTAAAGATCGAACACGTAGAGGGAACTTCACCAATCAAACAACTGGCTCCTGATTCTCAAGAAAAAGGGTTGCTAGGACAGTTGTTGGTGGGATCTTCAATGATGGTATAGCAGAGGATGTTCATCGTATTGTTAGGGAGTGTGGGTCAGTGTCTTCCATAACTTACCCTCTTCCCAAAGAAGAGATTACACATCGTGGGCTTCTTCAAGATGGATGCAGATTGGGTGCCTCATCTATAGTCTACACTAGTGTCAAATCGGCCCGGGCTTGTGTTCCAAAGTTACATCAGAAAATTTTAAGCGGAAGCACGGTTTGGGCATGCCAGTTAGGTGGAGAAAAGTCTCATGGAGCTGCTTTTCCAGATAGCTCCGATTCAGTAGAGGAAGAAGTGAATTTCGATGAGGAAGCAGATGTTGCAAAGAAAGTTCTAAACAACTTCCTTTCTTCATTGAATGTGCCTACTGCTTCTGTCAATGATGATGTCATCTGCCCCCCAGAGGAAACAGGATGATGAAACCATCAACCTACACAACAAATTATCTAATGGGCCCACAAATGTTCCACACGTATCAAAACCTGAGTTTGACCAAAACCGAGTATACCTACGTTAGGCCAGCCGAGTCGGAAGAAGATTTGCAGAGAACACTCTTTGTCTGCAACCTTCCTTTTGATGTTACTATTGAAGAAGTAAAACAGCGGTTCTCAGCATTTGGTGAAGTCCAGTCATTTGTTCCTGTTCTTCATCCAATCACGAAGAGACCAAGGGGAACCGGATTTCTTAAATTTGTAACAATGGATGCTGCTGAAGCTGCATTTTCTGCAGCAACTGCTGTAACTAGTTTGGGTATAATCCTCAAAGGCAGACAATTAAAAGTTTTGAAGGCTTTGAATAAGAAAGCAGCTCATGATAAGGAAGTAGAGAAGACCAAAAAGGAAGAGCATGACCATCGTAATCTCTACTTAGCTAAGGAAGGAGTTATTCTTGAAGGTACTCCAGCTGCCCAAGGAGTTTCAGATAGCGATATGTCGAAGCGTCGATCGTTGGAGCAGAAGAAGGAAACCAAGCTTCAATCACCGAACTTCTATGTTTCAAGGACGAGACTCATCATGTACAACGTACCCAAGTCGATGAACGAAAAGCAACTTAAAAGACTTTGCATAGAAGCAGTTACATCTCGAGCTACAAAACAAAAACCTACGATCCGGCAGATTAAGCTGTTGAAGGATTCTAACAAAGGAAAAGAAGTTTCGAAGAATCATTCTCGTGGGGTTGCTTTTATCGAGTTTTCAGAACATCAGCATGCGTTTGTGGCTCTTATAGTCCTTAATAATAATCCTGAAACTTTTACTTCTGAGCATCGTCCAATTGTGGAATTCGCTCTTGACAACATCCAGACGTTAAGGCAACGTAATGATAAGATCGAAGCTCAGCAGCAAGGATTCAGTAATGATGCAGGTGGCAACGGGAAAAACACTAGTTTTCACAAACCAGTCAACCAGTCAAACAATGAGTCAAGAAAACGCAAAACCCATCCAATGCCAGAAAGTAGGAACGCTAAGACGGTCGAAACAGAAGGAGCTGCTTCCGAGGGAGGTAAACCCGCTAAAAAACAAAAGGCTTCTCCTTCGAAGAAGCTTACTGATTCTAAGGACCATTTGGCGGTCCAACAAGAAGAAAAACGACCAAAGGGTCGCAGTGCAGCCATCGAAGGAACCACTTCTGGTCCAGCCAGGCCTGTGAAACGGTCAAGAGATCAGAACGAACCACGAAATGAAGATACTGGTTCGATGAAAAAGAAGGAAAAATAGACAAAATAAGGACCCATTAGGGCAAGACACGGTGGATAAACTCGACATACTTATCGAACAATATCGATCCAAGTTCTCAGGGAACCGAACCCACAGAAGCGATGGTCAAAAGCAAGGTTCCAGACGGCTTGGCCGGTGGTTCCAGTCATAGTTTCAGTATTCTCTCTGCAAGTCCATTCTAGTTTTTCTTGTAATCCCTTCTCTTAGAAGACTTGCACCGTTTAAATTTTGACAAATCGAACCGTTTTTACGAAGTGTTTTTTGAGAAAATTTCTTGATTTATGATCAAATATTTGGTGCCACATTTTACTCTTATGTTTCTTGATCTGTGCCACCATCTAGTGGCTAATTTTGCTTGTGCAAGAAAAAAGTGGAACATTGATGAATCTTGAATTGAGCATGGGTTATGTTTTGGGACCATTTGGGCCACTGTTTTAAATAGCACCAATTGTGGGTGCCACCCTAATGTGTATTGCATTTAATTGCTGTGTCAAATCATTTGAAATGCAGGATGTACAAGTAAGTATTTGATGCATAAGATTAATTGTTAGCTTTTAATAAATTTGGTTATAGAGTGATGCATTATATGTCACATTCTATGCCATG	3018	42.51	MMKPSTYTTNYLMGPQMFHTYQNLSLTKTEYTYVRPAESEEDLQRTLFVCNLPFDVTIEEVKQRFSAFGEVQSFVPVLHPITKRPRGTGFLKFVTMDAAEAAFSAATAVTSLGIILKGRQLKVLKALNKKAAHDKEVEKTKKEEHDHRNLYLAKEGVILEGTPAAQGVSDSDMSKRRSLEQKKETKLQSPNFYVSRTRLIMYNVPKSMNEKQLKRLCIEAVTSRATKQKPTIRQIKLLKDSNKGKEVSKNHSRGVAFIEFSEHQHAFVALIVLNNNPETFTSEHRPIVEFALDNIQTLRQRNDKIEAQQQGFSNDAGGNGKNTSFHKPVNQSNNESRKRKTHPMPESRNAKTVETEGAASEGGKPAKKQKASPSKKLTDSKDHLAVQQEEKRPKGRSAAIEGTTSGPARPVKRSRDQNEPRNEDTGSMKKKEK	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00888	433	PANTHER	RNA-BINDING MOTIF PROTEIN 14B	36	402	IPR051945	GO:0003729(PANTHER)
	Cati3g00888	433	CDD	RRM4-RBM28-like	197	294	-	-
	Cati3g00888	433	MobiDBLite	consensus disorder prediction	310	433	-	-
	Cati3g00888	433	SUPERFAMILY	RNA-binding domain, RBD	45	275	IPR035979	GO:0003676(InterPro)
	Cati3g00888	433	MobiDBLite	consensus disorder prediction	412	433	-	-
	Cati3g00888	433	MobiDBLite	consensus disorder prediction	164	184	-	-
	Cati3g00888	433	FunFam	RNA-binding motif protein 28	196	291	-	-
	Cati3g00888	433	Gene3D	-	34	138	IPR012677	-
	Cati3g00888	433	Gene3D	-	187	290	IPR012677	-
	Cati3g00888	433	MobiDBLite	consensus disorder prediction	310	331	-	-
	Cati3g00888	433	Pfam	RNA recognition motif	47	105	IPR000504	GO:0003723(InterPro)
	Cati3g00888	433	MobiDBLite	consensus disorder prediction	372	397	-	-
	Cati3g00888	433	Coils	Coil	288	315	-	-
	Cati3g00888	433	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	45	128	IPR000504	GO:0003723(InterPro)
	Cati3g00888	433	SMART	rrm1-1	198	290	IPR000504	GO:0003723(InterPro)
	Cati3g00888	433	SMART	rrm1-1	46	124	IPR000504	GO:0003723(InterPro)
	Cati3g00888	433	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	197	293	IPR000504	GO:0003723(InterPro)
	Cati3g00888	433	MobiDBLite	consensus disorder prediction	332	349	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00888	K14573	nucleolar protein 4

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:10746127	Cati4g01203	Cati-Chr4:27436814	dispersed