Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00925	GCTCATTAATTTATGCTTTTCAAGATTTACTGTTTCATACACATGTTTTTCTTCCTTTAATTCTCCTATAAATACCCTCGTACCTCTTCACCTTTGCATCACCCAACTCGTAGCTTTTTGTTCATTATTACTTCAAAAATGACCAAAAGATTGGTTACCTTCTTTGCATTCCTTTTGCTCCTTTTCGTTCTTGCCATCTTAGAAATAGAAGCTGTAGGGCCGACTCCAAAGTTATTTGAAAATCCAAGTAAAACATATTCTGGGAAATGCAACGATGAAGCCTGTGATAAAAAGTGCTCATTTTGGGAGGGTGCAGTCCATGGAGCGTGTCACGTGCGGGAAGACAAATTTGGTTGCTTTTGCTACTACAACTCTTACGAAGATAACTCTTACGGCTCACCACCTCCACCCAAAGCCAAGTCTCCTCCTTCTCCATCAACTCCTCCAAAAAGCGGCTCGCCTCCTCCAAAAGGTGGCTCTTCCCCACCTCCGCCCTATTGAGGATCGCGACCTACTCCCAAACATGAAAACTAAAACCTTGTCAATGAAATCCGAACTAAAGGTCAAAGCCGCCTAGAATGGGCCAGATCATGAACATATAGATATTTTAAGCCTACAAATATGAATAAATATAAAAATGCTTACTACTTAACAAATTGAGCATTTACTTGGGTTTGATGTTGGTTGCATGATTAATAGATGAATTACGATTGCCATGCATACGAATGATATAACTCCAAGTTATGGAACTACTGGATTCTGAGAGCATAAGCTAGTGCCATTAATGAGCCCTTAATGTCTGGATTTAGCGTTGTTGTCAACCATCTCCTTCACCACTAAAAGAAAGATAGATTGCTGAGTCGATAGCGTATGGTAGCTTGGTAGCTGTGTGAATCGGCTAGGCTCAGGAAATCAGTGAGGAATTGATGAAGATATGTTCATCGGGATGTGACATGGTTCCCGACCCATCATAAATTTCCCGGCTCGGGAAGTGGTTAATTGAGTTCCCGACAACACACAACACTCACACTCGGGAAGAGTATTGGTAAGTAGATTTGTTTGGAAGTAACTTTTGATTTCTGATACTATGGTTTGAAGTTCAGGTTACTGATAAAAGGGTAGTAGCAAGTTTGGGAGATAATTCATTTATGATAAAAAGGGGAGATTGTATTACTTTGATAAAGTGGGAAGTATTTCTGGAGTATGTTGATGATTTTAAAGACAAGAGGTTTCAAGATAAAGTTGTTCAAGATATATTGAAGTTTGTTACTTGCTGATCGTGAAGAGATTTGTTGCTGACAAGTATTGATTGTTGTTGATTCAGAAGAAGTGAAGATTGTGAATATTGTTTCAGATTGCAAGTTTCTGTTATAGTTGGTTATTTCCAACTTGAATACAAAGGGAGAGATTGTTAGGGTTTAAAATGTAAAGTTTTATTCAAGTTTTGTTTAAAGTGCAAATTTAGTTTAGTTAGTTGTATGG	1482	38.26	MTKRLVTFFAFLLLLFVLAILEIEAVGPTPKLFENPSKTYSGKCNDEACDKKCSFWEGAVHGACHVREDKFGCFCYYNSYEDNSYGSPPPPKAKSPPSPSTPPKSGSPPPKGGSSPPPPY	120

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00925	120	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	77	-	GO:0006952(PANTHER)
	Cati3g00925	120	SUPERFAMILY	Scorpion toxin-like	33	78	IPR036574	-
	Cati3g00925	120	MobiDBLite	consensus disorder prediction	83	120	-	-
	Cati3g00925	120	MobiDBLite	consensus disorder prediction	89	120	-	-
	Cati3g00925	120	Gene3D	-	29	78	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00925	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:11405733	Cati3g00925	Cati-Chr3:11517959	dispersed
	Cati	Cati-Chr3:11517959	Cati3g00938	Cati-Chr3:12413745	dispersed
	Cati	Cati-Chr3:11517959	Cati3g00925	Cati-Chr3:11517959	tandem

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cati10g03405	.	4	73	Plant Defensins gene family	AT5G63660	34.722	1.95e-10	49.7
	Cati10g03406	.	8	77	Plant Defensins gene family	AT2G02130	37.838	3.01e-10	49.3
	Cati2g00193	.	12	77	Plant Defensins gene family	AT2G02100	59.722	1.70e-23	83.2
	Cati3g00918	.	20	77	Plant Defensins gene family	AT1G19610	46.667	7.54e-11	53.1
	Cati3g00920	.	18	77	Plant Defensins gene family	AT1G19610	40.0	4.86e-11	53.5
	Cati3g00922	.	6	77	Plant Defensins gene family	AT1G19610	43.243	1.33e-13	60.8
	Cati3g00925	.	6	77	Plant Defensins gene family	AT1G19610	44.595	2.40e-14	61.6
	Cati3g00924	.	6	77	Plant Defensins gene family	AT1G19610	44.595	2.40e-14	61.6
	Cati3g00927	.	7	72	Plant Defensins gene family	AT1G19610	46.97	1.55e-16	67.8
	Cati3g00928	.	17	78	Plant Defensins gene family	AT1G19610	48.387	4.12e-19	73.2
	Cati3g00929	.	6	78	Plant Defensins gene family	AT1G19610	41.892	2.28e-17	70.1
	Cati3g00930	.	6	78	Plant Defensins gene family	AT1G19610	43.243	2.09e-18	72.8
	Cati3g00931	.	7	78	Plant Defensins gene family	AT1G19610	45.205	5.11e-19	72.4
	Cati3g00932	.	26	78	Plant Defensins gene family	AT1G19610	50.0	4.34e-15	63.9
	Cati3g00936	.	9	78	Plant Defensins gene family	AT1G19610	52.857	2.62e-17	75.5
	Cati3g00937	.	26	78	Plant Defensins gene family	AT1G19610	58.491	2.17e-14	67.0
	Cati3g00938	.	1	77	Plant Defensins gene family	AT1G19610	50.649	3.66e-25	89.0