Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00955	GAATGATGAAGCTGGAGCACCTGAGTTTAAGGAAAGAGAGCTCTCATCATCCATCGAAATCATCATCAGAGGGAAATGGCCGCCATCTTAGCTCGCAAGTCTATCTCCGCTCTTCGTTATCGGAATCTTGTTGTGGCAGGACAAGCCTTGCAGGGACCTAACATCCATGGGACGACTTCTGGTGCACGTTCATTTGCAACCAAGCACTCATTTTCAACTGATAAAGATGATGAAGAAAGAGAAAAGCTTGCAAAGGAGATATCAAAAGACTGGAGTTCAGTTTTTGAGCGGAGCATCAATACCTTATTTCTAACTGAGTTAGTTCGAGGTCTGTCTCTGACACTCAAATACTTCTTTGAGCCAAAAGTTACTATCAATTATCCATTTGAGAAGGGTCCTTTAAGCCCTCGTTTTCGAGGAGAACATGCCCTCCGACGATATCCAACTGGAGAGGAGCGTTGTATTGCCTGTAAACTTTGTGAAGCTATATGCCCAGCTCAAGCTATCACCATAGAAGCAGAGGAACGAGAAGATGGCAGCCGCAGAACAACGAGGAACTACTATACGATAAGGAGAAGCTCCTTGAAAATGGGGATCGGTGGGAAACGGAGATCGCTGAGAATCTTAGATCCGAAAGCCTCTATCGTTCTATGCAGTAGAGCTGAGAATGTGAGCAACTTTGTTCAAGTAGATTCGACTTTTGGACCGGATACCAGACTTGTATACAAGACTTTTGCTACACTGTACTTCATTGTCATATTTGATGATTCTGAAAATGAGCTTGCCATTCTAGATCTTATGCAAGTATTTGTGGAGACGTTGGACAAATGTTTCAGCAATGTTTGTGAGCTTGATATAGTGTTCAATTTCAACAAGGTACATACCATCCTGGATGAGATTATCTTGGGAGGTCAGGTTATTGAAATGAGCTCTTCTGAAGTTGTAAAGGCAGCTGGAGAAGAACCCAAATTCAATCCTTGGAGTTCCAAAATCCATATCCGGTTGGCAGGGACGATAGATAGATAGAGATAGCGGACCACCACTTACCTCGGTGTAAGCTTGTGGTCCTAACAAAACTATCCTAGATTCTTCCAATGCTCAAGTTTCAAACAAATGTGTCCAGTACCCTTAATACCCAATCCAATCCGTTTATTTGTTGGCTAATAGGAATGGATGCTGATGAGGAATCAACAAAATATCAGCAAGTAGCAGATGAAACTCAAACTACCCATATGTTTTTGTTTTTGGGTCTTTAATTTATAGGTTCAATCATTTTATAATTACATCATGTATCTTGAAGCAATGCAATTTAACACTGCTATCAAATGCATTTTCAATTTGATTGATTGCACAAGTTTTCTTTTGTTTTGTCCATGTGTTGTTGTCTTACATACCAAAT	1399	40.81	MAAILARKSISALRYRNLVVAGQALQGPNIHGTTSGARSFATKHSFSTDKDDEEREKLAKEISKDWSSVFERSINTLFLTELVRGLSLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRNYYTIRRSSLKMGIGGKRRSLRILDPKASIVLCSRAENVSNFVQVDSTFGPDTRLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDIVFNFNKVHTILDEIILGGQVIEMSSSEVVKAAGEEPKFNPWSSKIHIRLAGTIDR	316

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00955	316	PANTHER	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL	61	161	IPR010226	GO:0003954(PANTHER)\|GO:0005747(PANTHER)\|GO:0006120(PANTHER)\|GO:0009060(PANTHER)\|GO:0016020(InterPro)\|GO:0016651(InterPro)\|GO:0032981(PANTHER)\|GO:0045272(PANTHER)\|GO:0051539(InterPro)
	Cati3g00955	316	Gene3D	-	157	306	-	-
	Cati3g00955	316	SUPERFAMILY	4Fe-4S ferredoxins	102	149	-	-
	Cati3g00955	316	Pfam	Clathrin adaptor complex small chain	191	292	IPR022775	-
	Cati3g00955	316	Pfam	4Fe-4S binding domain	126	145	IPR017896	-
	Cati3g00955	316	Gene3D	-	107	156	-	-
	Cati3g00955	316	SUPERFAMILY	SNARE-like	191	294	IPR011012	-
	Cati3g00955	316	ProSitePatterns	Clathrin adaptor complexes small chain signature.	215	225	IPR000804	GO:0006886(InterPro)\|GO:0016192(InterPro)\|GO:0030117(InterPro)
	Cati3g00955	316	ProSiteProfiles	4Fe-4S ferredoxin-type iron-sulfur binding domain profile.	120	149	IPR017896	-
	Cati3g00955	316	ProSitePatterns	4Fe-4S ferredoxin-type iron-sulfur binding region signature.	129	140	IPR017900	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00955	K12399	AP-3 complex subunit sigma

Event-related genes

Select	Gene_1	Gene_2	Event_name
	35664	Cati3g00955	Cati7g02933

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr1:7442818	Cati3g00955	Cati-Chr3:12778801	dispersed
	Cati	Cati-Chr1:7442818	Cati3g00955	Cati-Chr3:12778801	dispersed
	Cati	Cati-Chr3:12778801	Cati7g02933	Cati-Chr7:64807049	dispersed