AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00956 CCAGCTTCATCATTCAGCCACGAAGTACGAACCGGAATATTTTTATTTAGACCCCCTACACTATTATGTAATTTCAATTGAACCCCCAAACTTTTTGCGTACAACAAACACGGCGTGGGGTACAAAACAATCCATCCCATTCATGTTTAGGGTTTATAGAAAAGCCCTTACGATTTTCGAGCGAGCGAGGGAGAAAGAAAGAAAGGATGGCTTCGGCAAGCAGATCGCCATTAATGTCGTCTGGTGCGCGAATACTTTCAAGAACCCTAAGCCCTAAGTGCGTGCCCCTTTCTCCATTTCCTTCATCTACAAGAGCACTCCCTCGTGCAGCTTCAAGGATTGTTGGAGCATTGGGAATGGTGGAGTCCATGATGCCTCTTCACAGCGCCATTGCATCTGCTCGTCTCAACTCAAGTCTTGCTGCTAATTCCACCTACTGGAGCTGGCTTTCACAAGGAACCCAAAGAATACAACTTTGA 479 46.14 MASASRSPLMSSGARILSRTLSPKCVPLSPFPSSTRALPRAASRIVGALGMVESMMPLHSAIASARLNSSLAANSTYWSWLSQGTQRIQL 90
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00956 90 PANTHER OS02G0230000 PROTEIN 2 83 IPR043459 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00956 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:12824089 Cati3g03893 Cati-Chr3:102723473 dispersed
Cati Cati-Chr3:12824089 Cati5g01349 Cati-Chr5:16102791 wgd