Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g00961	GCATATGCAAGATTGCATTTTGCTCCCCTGAAACCACCCACGAACGCACAAATCGGTTTTGGCGTTTCAAAGGCAAAAAAAGCGTCACCTTTCTTCATACACAAACACCAGATCTGTTTATCTCCTAGAGAGACACAGGAAAGCTCGCCCAATGGATGAGAAGTTAATACAGAGGTTGGAATCTGCCATAGCCAGGCTAGAATCAATCTCCCTCGGTTCTCAGCCCCAAGCCGTTGCATTTGACGCCGCATCAGCCTCAAGCGAACCATCAATCATCGCATTTGAAGATCTGGTGGCGGAATATGTTGGTAAGGTTACCGATGTTGCGGGGAAGATTGGCGGACAAGTTCAGGATATTACGAATATTATCAGTCAAGCATTCTCTGTTGAAAAGGAGCTTCTCATGAGGATCAAACAAACACAGAAACCTGATGCAAGAGGAATGGCACAATTTCTCGAGCCATTATATGAAAAGTTAACTGAAGCAAATAACATGTCAGAAGGACCACGTTCTGATTTCTTCAACCACTTCAAAGCTGCTTCTGAGAGTCTAACAGCTTTAGCATGGATTGCATATACGGGGAAAAATTGCGGAATGAGCATGCCTATTGGACATGTGGAAGAATGTTGGCAGTCAGCAGAATTTTACAGCAACAAGGTTCTTATAGAATACAGAAGTAAAGATCCGGAACATGTGGAATGGGTAAAAGCTCTTAAGGAACTTTATGTACCAGGGTTAAGGGATTACGTGAAGAAGCATTATCCTTTGGGCCCTGTATGGAGTGCGGCAGGAGCAACGGTATCTGCTTCTAAACCAGGTGCTCCTGCTCCTCCAGGGCCTCCGCCAGCGTCACTCAGCTCGGGATCTTCTACATCATCTTCATCACAACCAAAGAAAGGAATGGCCGCTGTTTTTCAGGAAATTGGTTCAAAGCCGGTTACAGCTGGATTAAGAAAAGTTACAGATGATATGAAGAGCAAAAATCGTGCAGATAGAGTCGGTGTTGTCAGTAGTGGTGAAAAACCAGTCCGCAAGAGTGCACCGGCTGCTGCTAAAGTAGGACCACCCAAGTTTGAGCTTGTAATGGGTCGTAAATGGGTTGTTGAGAATCAAATTGGCGCCAAGGATTTGGTAATTGATGACTGTGATCCAAGGCAGACGGTATATATTTTTGGATGCAAAGATTCAGTTCTACAAATCCAAGGGAAAGTTAACAACATAACCGTCGACAAATGCACAAAAATGGGTGTCGTATTCTCGGATGTTGTTGCTGCCTTCGAAATTGTTAATTGCAACAGTGTTGAGGTGCAATGCCAGGGTGTAGCCCCTACTATTTCAATAGACAACACGGCAGGATGCCAATTATACTTAAGTCCAGATTCTCTCGAGTCTTCTATAACAACCGCCAAAGCAAGTGAAATCAATGTGATGGTACCAAGTGACGATCCCGATGCTGATTTGGTGGAACATGCTTTGCCACAACAGTACATAAACACTTACAAGGATGGCCACTTTGTTACCATCCCAGTCTCCCACTCTGGAGGCTAACGAGTTGAAAGTATATGCATTTGAGTTTCAACCATTTGCTATTTTGTGTTTTCCCCGTTGCCTTTCTCTTCAAAATGCCGAAATTGCTTCCCATTTTTTAATTTTTTGACATTCGTTCTTTAAAATTGTTGCTTTTCGACCATTTCTTTTTAAAGTTTTCATGTTTTGGTTTGGTTTATCTATCATTTGTATTTGGAATTATGGTCTTTAAGAGACGTTGCTTTACGATATGGTTATACTATATTCTTTGGGTATTCTACTCTTTCTTGACCGTTAGTCA	1829	42.59	MDEKLIQRLESAIARLESISLGSQPQAVAFDAASASSEPSIIAFEDLVAEYVGKVTDVAGKIGGQVQDITNIISQAFSVEKELLMRIKQTQKPDARGMAQFLEPLYEKLTEANNMSEGPRSDFFNHFKAASESLTALAWIAYTGKNCGMSMPIGHVEECWQSAEFYSNKVLIEYRSKDPEHVEWVKALKELYVPGLRDYVKKHYPLGPVWSAAGATVSASKPGAPAPPGPPPASLSSGSSTSSSSQPKKGMAAVFQEIGSKPVTAGLRKVTDDMKSKNRADRVGVVSSGEKPVRKSAPAAAKVGPPKFELVMGRKWVVENQIGAKDLVIDDCDPRQTVYIFGCKDSVLQIQGKVNNITVDKCTKMGVVFSDVVAAFEIVNCNSVEVQCQGVAPTISIDNTAGCQLYLSPDSLESSITTAKASEINVMVPSDDPDADLVEHALPQQYINTYKDGHFVTIPVSHSGG	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g00961	465	Gene3D	-	304	464	IPR016098	-
	Cati3g00961	465	Pfam	CAP, N-terminal domain	44	206	IPR053950	-
	Cati3g00961	465	Pfam	Adenylate cyclase associated (CAP) C terminal	305	462	IPR013912	GO:0003779(InterPro)\|GO:0007010(InterPro)
	Cati3g00961	465	MobiDBLite	consensus disorder prediction	272	291	-	-
	Cati3g00961	465	MobiDBLite	consensus disorder prediction	217	251	-	-
	Cati3g00961	465	PANTHER	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	3	463	IPR001837	GO:0003779(PANTHER)\|GO:0003779(InterPro)\|GO:0005737(PANTHER)\|GO:0007010(InterPro)\|GO:0007015(PANTHER)\|GO:0008179(PANTHER)\|GO:0019933(PANTHER)
	Cati3g00961	465	SUPERFAMILY	N-terminal domain of adenylylcyclase associated protein, CAP	41	232	IPR036222	-
	Cati3g00961	465	MobiDBLite	consensus disorder prediction	235	250	-	-
	Cati3g00961	465	ProSitePatterns	CAP protein signature 1.	5	17	IPR018106	-
	Cati3g00961	465	SUPERFAMILY	C-terminal domain of adenylylcyclase associated protein	305	464	IPR036223	-
	Cati3g00961	465	ProSiteProfiles	C-CAP-cofactor C-like domain profile.	305	442	IPR017901	-
	Cati3g00961	465	FunFam	Adenylyl cyclase-associated protein	40	215	-	-
	Cati3g00961	465	Gene3D	-	40	215	IPR036222	-
	Cati3g00961	465	SMART	carp	381	418	IPR006599	-
	Cati3g00961	465	SMART	carp	343	380	IPR006599	-
	Cati3g00961	465	Pfam	CAP N-terminal conserved motif	3	36	IPR013992	GO:0003779(InterPro)\|GO:0007010(InterPro)
	Cati3g00961	465	FunFam	Adenylyl cyclase-associated protein	304	464	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g00961	K17261	adenylyl cyclase-associated protein

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:12944795	Cati5g01347	Cati-Chr5:16044690	wgd