AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00979 ATGTTATTTGAACAGATAGCTATTGTTATAGAAGCTAGGCCAAATCCGAAAAGATACGAGGAAAAATTGTTTGTTGGAGGGGATACTCGGGTGTCACCTCTCCCCACCAGGAAAAGTCATTGTCACACATTGACCAATGCAAAAGACCTCAAAATATCCTTCAATGACAAGAACAATAAGAGAACCTTTTCTAAAGATTTTGAACCAAGGCCAGATGCTACAACTTACGATAATGGAACTGGTTTGAAAGATAAGATAACGTTTGACAAAGATTTTGAGCCGAGGCCTGATGCTACGGTCTACAATAACGACATAGGTTTGAAAGGTAAGAGAACTTTTGAGAAAGATTTCGAACCAAGACCAGATGCTACAATTTACGACAATGGAACCGGTTTGAAAGGTAAGATGACTTTTGGTAAAGATTTTGAGCCTAGACCCGATGCTACCATATACGATAACGGAACAAGTTTGAAAGGCAAGAGATCTTTTGACAAAGATTTCGAGCCAAGACCTGATGCTACAGTATATGATAATGGGACAGGTTTAAAAGGTAAGAGATCTTTTGGTAAAGATTTTGAACCAAGACCCGATGCTACTATTTATGATAACGGAACTGGTTTGAAAGGCAAGAGAACTTTCGGTAAAGATTTCGAGCCAAGACCTGATGCCACAATTTACGATAATGGGACTGGTTTAAAAGGTAAGAGAACTTTTGGTAAAGATTTTGAGCCAAGACCTGATGCCACGGTTTACGATAATGGAATTGGTTTAAAAGGTAAGAAAACTTTCGGTAAAGATTTTGAGCCGAGACCTGATGCCACTGTTTACGACAGTGGAACAGGTTTGAAAGGTAAAAGAACTTTTGACGAGGACAAAGTTATAACAAGTGTTACAGGATACGATGTGTAA 909 38.72 MLFEQIAIVIEARPNPKRYEEKLFVGGDTRVSPLPTRKSHCHTLTNAKDLKISFNDKNNKRTFSKDFEPRPDATTYDNGTGLKDKITFDKDFEPRPDATVYNNDIGLKGKRTFEKDFEPRPDATIYDNGTGLKGKMTFGKDFEPRPDATIYDNGTSLKGKRSFDKDFEPRPDATVYDNGTGLKGKRSFGKDFEPRPDATIYDNGTGLKGKRTFGKDFEPRPDATIYDNGTGLKGKRTFGKDFEPRPDATVYDNGIGLKGKKTFGKDFEPRPDATVYDSGTGLKGKRTFDEDKVITSVTGYDV 302
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00979 302 Pfam Organ specific protein 135 202 IPR024489 -
Cati3g00979 302 Pfam Organ specific protein 211 277 IPR024489 -
Cati3g00979 302 Pfam Organ specific protein 188 252 IPR024489 -
Cati3g00979 302 Pfam Organ specific protein 29 127 IPR024489 -
Cati3g00979 302 PANTHER PROTEIN, PUTATIVE-RELATED 139 228 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00979 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:13029157 Cati3g00979 Cati-Chr3:13086727 dispersed
Cati Cati-Chr3:13086727 Cati3g00985 Cati-Chr3:13240838 dispersed
Cati Cati-Chr3:13086727 Cati3g00981 Cati-Chr3:13114892 proximal