AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00993 TACTTGGGATACGTCAATTTGCTTATTAATCAAAAAATTAAGTGTTAACTAATAAGTTAGTTGCTCAATTATCAATAATATTTTCTTTATTTGCTGACCAATTAGTTAATACATTATATCAAAATTTGAGAAAATAAAGTATAATAAAGTGGGATGCTTATCCCAATTAAAAACCCAGCATATCCTATAACTCTCAACCACTTCACCTTTCATCTTAATTTGTATCCTCTTCTCAGAAACCAACCAACCATGGCTTCTTCTTTCTCTTTCACCTTTCATCTCTTCCATGTTCTATTGCTCATAAAGATTTGCAGTTGTCGCGAGATTTTCGACAAGAAACCGATGGTCAAAAACGAAGAAAATCATATAAAAGTTTATGGGAGAAAAGGTATTGATGATTTGGATCCTGCTCTAAGAGTGTTCTTCAACGTAAACGATTTATATATGGGCAAAAAGATGGCGATTTATTTCGCCCTTAACGACCCTTCCACGACTCCTCGGCTTCTAGCCAGAGAACAAGCCGACTCGATACCGTTCTCTTCGTCAAACCTTTCATCTCTTCTTGAGTTTTTATCATTAGCCGAGGACTCGGCGCAAGCCAAAGCCATGAAGATGACGCTCCAACAATGCGAGCTCGAGCCGGCAGCTGGCGAGGTCAGGTTCTGTGCCACCTCCTTGGAATCCATGCTGGACGCGACACGTGGCATACTGGGCATGGTCAAACTGAAGGTGTTGACTACCAAGATCCATGATTCCGTGGGCTCCAACCACACGGCTTTGCAGCGGTATACGTTTTTGAAGGAGCCGCTAGAGCTTCAGGTTCGTGACATGGTGGCTTGTCACACCATGGCTTACCCTTATGCGGTTTATTATTGCCACGGTCAAAAGGGGTCGAACAGGGCGTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATAGGGTGGACGCGATTGCTGTCTGCCACATGGACACTTCCAGGTGGGACCCCGACCACGTGGCGTTCCACGTGCTCGGAGGCCAGCCTGGCAGCTCCCCGGTCTGCCATTTCCTCCCGGCCGATAATATTGTGTGGATCCCAATTTCATCAGAAAATACGACCCAGATGAGAGGA 1110 44.59 MLIPIKNPAYPITLNHFTFHLNLYPLLRNQPTMASSFSFTFHLFHVLLLIKICSCREIFDKKPMVKNEENHIKVYGRKGIDDLDPALRVFFNVNDLYMGKKMAIYFALNDPSTTPRLLAREQADSIPFSSSNLSSLLEFLSLAEDSAQAKAMKMTLQQCELEPAAGEVRFCATSLESMLDATRGILGMVKLKVLTTKIHDSVGSNHTALQRYTFLKEPLELQVRDMVACHTMAYPYAVYYCHGQKGSNRAFEISLGGENGNRVDAIAVCHMDTSRWDPDHVAFHVLGGQPGSSPVCHFLPADNIVWIPISSENTTQMRG 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00993 319 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 73 308 IPR044816 -
Cati3g00993 319 ProSiteProfiles BURP domain profile. 90 309 IPR004873 -
Cati3g00993 319 SMART BURP-2 88 309 IPR004873 -
Cati3g00993 319 Pfam BURP domain 89 307 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00993 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:13714700 Cati6g00259 Cati-Chr6:2231487 dispersed
Cati Cati-Chr3:13323882 Cati3g00993 Cati-Chr3:13714700 proximal