AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00997 GCCTGATTACAACATGTTTGAAATGAAATCTGCTATTTTTGGATTCGAACCTTCTTCTGGTAACTGAATGAATCTGAATGTTTCCATCCAATGTCGATCCTAGGCTCAAATATGCCGAGCGAGGTTGGTCTGCGGCTGCTTCTATGTCCGCTTGGTTCCAACATTGTTGTAAGAACAGCATGGCGATTGAGACGAACAATCGGAATGAGGAACAAAAGTGGCTTTTATACTGGGCAGCATATGGGAGTTTTAGCGTTGCCGAAATATTTGCAGACAAAATCATATACTGGTTTCCACTTTATCATCACATGAAGTTTGCTTTTCTTGTTTGGCTTCAGCTTCCTACCACCAATGGTGCTAAACAGTTATACATGAATCATTTACGTCCTTTCCTTCTGAGACATCAAGCTAACCTTGATCAACTTGTGGGGATCTTGTACGGCGAAACATTCATGAAGGCAATTGTGATGAAGATCTTGATAGCAGCAAAGCATTTTGTGGACAATAGCAGTCAATCTGTTCCACCACCAGAGGGAAGAGCAATCACAGGCCACAGACAACAAATCGAGAGCTCAGATGACAGCGATGATGATGAAGATGTAGTTTTTCCTGACAGCTTTTAGCATCAAGTAAATATGCCAATCCCATTCTTTTATAATTGGATTATATAAATAAATAAATTGTATTGCATACATCCCTCTTATCACATTTACCAGTAATATCTACAAAGGCAAGAACCAACATGTAAAGAGTGGAATCAGCTTTTACCTTCTCAACATGATCTCCAATTGAAAGATATTTGAAACAAGTTTCATAACTGTAGACAGTCATTGGCTGTTTGCATAAAACCAAAAGAACAAACCCAGTAAATCCCAAAATAAG 882 38.89 MFPSNVDPRLKYAERGWSAAASMSAWFQHCCKNSMAIETNNRNEEQKWLLYWAAYGSFSVAEIFADKIIYWFPLYHHMKFAFLVWLQLPTTNGAKQLYMNHLRPFLLRHQANLDQLVGILYGETFMKAIVMKILIAAKHFVDNSSQSVPPPEGRAITGHRQQIESSDDSDDDEDVVFPDSF 181
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00997 181 PANTHER HVA22-LIKE PROTEINS 35 118 IPR004345 -
Cati3g00997 181 Pfam TB2-DP1, HVA22 family 35 105 IPR004345 -
Cati3g00997 181 MobiDBLite consensus disorder prediction 145 181 - -
Cati3g00997 181 MobiDBLite consensus disorder prediction 167 181 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00997 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35665 Cati3g00997 Cati7g02919
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:13841833 Cati7g02921 Cati-Chr7:64702857 dispersed
Cati Cati-Chr3:13841833 Cati11g02410 Cati-Chr11:60537787 transposed