Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00999 | ATGGGAGCTCATGTTAGCAAGAAATCAACTGCTGCTACCTCCTCCGTTTCACCTGCTATGTCTTTGAAAGATACCCAACAAATCATCACAGAGCTTAATGCATATGAAGCTGCCTGCAGATCAGATGCTGATTTGCAATCTTTCGATACTATGCTCCATGCTCGGGCTAATAACGTAATCAATACTTTGGCTGTGGGTGTTGAAGTTCGGGCTTTATCTTTCGATACCCTAAAAGAAGTTACAGAGTGTTTGTTGGAAATGAATCAAGAAGTTGTGAAGGTGATATTGCATTGCAAGAAAGATATCTGGAAGAATCAAGAATTGTTTGAATTGGTGGAGGAATATTTCGAGAATAGCCTTCAAACGCTTGATTTCTGTGCAGCGTTGGATAAATGCTTGAAGAGGGTGCGAGATAGCCAGCTGATGATTCTTGTGGCTTTGCAGCATTTTGATGAGGATGAAGGTGTGGAGGAAAATAGGTATGAAAAGACCCTTGAAGATCTGAAGAACTTCAAGGATGCTGGTGATCCGTTCACCGAAGAATTCTTCAAGATATTTCATTCGGTATACAGACAACAAATGGCGATGCTTGACAAGCTACAAGCCAAGAAAACAAAGCTGGACAAGAAAGTGAAGTACGTTCAGACATGGAGGAAAGTGTCATCTGTCATCTTTGTGGCTACTTTTGCAGCTGTTTTGATATGCTCTGTGGTGGCAGCGGCCATAGCTGCACCGCCTGTGGCCGCAGCGCTTGCTGCTGCCGCTGCGATCCCTCTTGGTTCGATGGGGAAGTGGATCAACTCCCTTTTGAAAAACTATGAAAACGCGATTAAAGGGCAAAAGGAGGTCATAAGCTCTATGCAAGTAGGGGGTTATGTGGCTATCAGGGATCTTGATACGATTCGGGTTCTTGTGGATAGGCTTCAAATGGATATAGAGGAGCTGATGAGGAAGGCTGAGCATGTGATTGAGGGAGGAGATGAAATGGTGAAAATTGCAATTGAAGAGATCAAGTTAAAACTGAATTCATTTATGAAGAATGGATGCAGGCCGATAATTGCAGCCGTGATGTTAGACGAGCTAGGACCGTTGTCTTGCAGAGGATCATCAAGCCACCACATCATCAATGAAAGCTCCTATACTCTGATGTACAAGAGTATGGAGACGAAGGTTAGAATCCATGAGGATTGGAGGATAGTAGGGTCAAAATCTATGGTGGTGGTTCCTGGCAGTAAAGGAGGGTGCGCGGATACGGCTGATACGGTGGTGCTCGCCACCCACATGTTCTTATGTTACTTGAATTCAAGATTCTTCTATTTTATCATTATCAAAGAAAAGAGTATTTAATAGATTCAATAATAGACAGAATTACCATAACTGTCGATGTGAATAAAAACCTTGTAAGATTCATTCTTTTATACCCTATTCCTTTAGTCTCTCTTCTCCATGATTCAATATTCATTACATTATATTTCT | 1476 | 42.07 | MGAHVSKKSTAATSSVSPAMSLKDTQQIITELNAYEAACRSDADLQSFDTMLHARANNVINTLAVGVEVRALSFDTLKEVTECLLEMNQEVVKVILHCKKDIWKNQELFELVEEYFENSLQTLDFCAALDKCLKRVRDSQLMILVALQHFDEDEGVEENRYEKTLEDLKNFKDAGDPFTEEFFKIFHSVYRQQMAMLDKLQAKKTKLDKKVKYVQTWRKVSSVIFVATFAAVLICSVVAAAIAAPPVAAALAAAAAIPLGSMGKWINSLLKNYENAIKGQKEVISSMQVGGYVAIRDLDTIRVLVDRLQMDIEELMRKAEHVIEGGDEMVKIAIEEIKLKLNSFMKNGCRPIIAAVMLDELGPLSCRGSSSHHIINESSYTLMYKSMETKVRIHEDWRIVGSKSMVVVPGSKGGCADTADTVVLATHMFLCYLNSRFFYFIIIKEKSI | 448 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00999 | 448 | Coils | Coil | 298 | 318 | - | - | |
| Cati3g00999 | 448 | Pfam | Protein of unknown function (DUF677) | 45 | 346 | IPR007749 | - | |
| Cati3g00999 | 448 | Coils | Coil | 190 | 210 | - | - | |
| Cati3g00999 | 448 | PANTHER | UPF0496 PROTEIN 3-RELATED | 14 | 346 | IPR007749 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00999 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:13929592 | Cati8g02099 | Cati-Chr8:17281824 | dispersed | |
| Cati | Cati-Chr3:13929592 | Cati11g00582 | Cati-Chr11:6358834 | transposed |