Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g01001 | CACAACTGCAATCTTCCTTCTAGTGAAACTAACCATAAACAAGAAGATATCACCCGTTAGCGCGCTTTCTCTCTCCTCTCTCTCTCTCTCTCTCTCACACACACACAAACACACACTGACACACATTCTCAAATTCAATTTTGATCAGAAGCAATTAATGGAGCTCCGATCAATTCAATCGCCAGTCGTTAGTAGTCTAGCTACACAAGGCCTTATTGAAAAGCAGCAACTCATATGCTATCGCCACCTTATCAGATCCTTTGGTACCAAGAGAATTCTTCACTCAAGTTCTATCAAGCTTAGACCTGTTCGATTCAAGCCTCAAGCCTCAAGTGCAACGAGAACAGGTTCACAGCCTGCTGACACGATTTCAAAAGATGGTGAGAAAGACGGAAATCTCATCTTTGTTGCAGGAGCGACCGGCAAAGTTGGTTCGCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAACGTTCGAGCTGGTGTGCGAAGTACTCAAAGAGCAGAAGCTTTGGTGAAAAGCGTGCAGCAGATGAAACTTGATGAAGCATCATCTGATGGAAGTCAGCCTATAGAGAAGCTTGAACTTGTGGAGTGTGACTTGGAGAAACCAGAGCAGATTAAGCCGGCATTGGGCAGGGCTTCAACAGTTATATGCTGCATTGGGGCTAGCGAGAAGGAGATATTTGATGTTACTGGACCATACCGAATTGATTTTCAAGCCACAAAAAATCTTATTGATGCAGCTACTGCTTCAAAAGCGAAACAATTTTTTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGCTTTCCTGCTGCTGTATTGAATTTGTTCTGGGGAGTCCTATGCTGGAAAAGGAAGGCTGAAGAAGCACTGATTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGAGGAATGGAGCGTCCTACGGATTCTTTCAAGGAAACTCATAATCTTGCCCTCTATACAGAAGATACTTTATTTGGTGGTTTAGTATCGAATCTTCAGGTGGCAGAACTCCTTGCCTTCATGGCCAAAAACCCTACTCTCTCTTATTGTAAAGTTGTGGAAGTAATTGCAGAAACAACAGCACCATTGACCCCCATGGGGGATCTCCTAGCAAAAATACCACCTCAACGTGCTCCACCCAAGGCACCAGAAGCTATCAAAGAACCTGAGCCTGTCCCCAAGAGCACCAGTTCTGAGAGTCCAAGCATTGTCGCTGAAACACAATCCCACTATGAAGGTTTGAAACCTCCTGTATCCCCGATTCCAACTGCACCTGGTGGCAGTAAGGTAGTAGTAGAAGCAGTATCTACTTCTGCTGATTCTGGAACCACCACAATCTATGAAGGTTTGAAACCTCCTGTATCCCCGATTCCAACTGCACCTGGTGGCAGTAAGGTAATAGTAGAAGCAGTATCTACTTCTGCTGATTCTGGAACCACTACAATGTCAGAAATCACCACAACTTCAGAAACAATAGCTGTTACAGCTGAACCTGCACCAGTGGCCGTAGGATTGCAAACAACCAGGCCTCTCTCTCCTTATGCTGCTTATGAGAACCTGAAGCCACCTACCTCTCCAACCCCGACACCAAGTGGATCCAAAGCGACACCGTCTAGTTCCTCTGCTACACCAGAAATTGCAACAGAACCCACTACAAGCATTGATACCATTGTGGAGGTTGAAGATGGTGACAACGGGTCTCCTATTGCTTCCACACCGGAGAACACCTCAGCTAGCACTGTAGTGAAGCCAAGGCCACTTTCACCGTACCCCATGTATGAAAACTTGAAGCCTCCAAGTTCTCCTATCCCTTCCACCCCTCAATAAGTGATGAGTGGTATGAATTCAGATTTCTTCTGTTAAAGATGGAAACTGAGTTGAGGAGATGTGACATAAGTATACATGTATAGTAGATCCGGAATGTAAAATGAGCTTTTGAGGCATATTTAGGCAAACAATCGAATTTCACCCCATTTTTTCATTGTAATATTGAAATCGGTATGCATACATCTATGGATCATTTCACTTCCAATGCATTGAAGTTTAAAACCATGCAAATGTATTGACACTTACAGGTAACGGAAAGCTAGTCTCGTCCATTAATCCAAGCTTTTCT | 2129 | 44.01 | MELRSIQSPVVSSLATQGLIEKQQLICYRHLIRSFGTKRILHSSSIKLRPVRFKPQASSATRTGSQPADTISKDGEKDGNLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAEALVKSVQQMKLDEASSDGSQPIEKLELVECDLEKPEQIKPALGRASTVICCIGASEKEIFDVTGPYRIDFQATKNLIDAATASKAKQFFLVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALIASGIPYTIVRPGGMERPTDSFKETHNLALYTEDTLFGGLVSNLQVAELLAFMAKNPTLSYCKVVEVIAETTAPLTPMGDLLAKIPPQRAPPKAPEAIKEPEPVPKSTSSESPSIVAETQSHYEGLKPPVSPIPTAPGGSKVVVEAVSTSADSGTTTIYEGLKPPVSPIPTAPGGSKVIVEAVSTSADSGTTTMSEITTTSETIAVTAEPAPVAVGLQTTRPLSPYAAYENLKPPTSPTPTPSGSKATPSSSSATPEIATEPTTSIDTIVEVEDGDNGSPIASTPENTSASTVVKPRPLSPYPMYENLKPPSSPIPSTPQ | 560 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g01001 | 560 | Gene3D | - | 80 | 326 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 465 | 560 | - | - | |
| Cati3g01001 | 560 | Pfam | NAD(P)H-binding | 86 | 297 | IPR016040 | - | |
| Cati3g01001 | 560 | PANTHER | PROTEIN TIC 62, CHLOROPLASTIC | 1 | 506 | IPR044719 | - | |
| Cati3g01001 | 560 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 79 | 327 | IPR036291 | - | |
| Cati3g01001 | 560 | FunFam | Protein TIC 62, chloroplastic | 78 | 328 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 328 | 353 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 56 | 70 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 520 | 535 | - | - | |
| Cati3g01001 | 560 | CDD | SDR-a5 | 82 | 311 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 483 | 507 | - | - | |
| Cati3g01001 | 560 | MobiDBLite | consensus disorder prediction | 543 | 560 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g01001 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:13938650 | Cati3g01004 | Cati-Chr3:13954284 | dispersed | |
| Cati | Cati-Chr3:13938474 | Cati3g01001 | Cati-Chr3:13938650 | tandem | |
| Cati | Cati-Chr3:13938650 | Cati3g01002 | Cati-Chr3:13938807 | tandem |