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AGRP

Asteraceae Genomic Research Platform

AGRP Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g01010 ATGTTGGTGGTGACCATGATCCCATTTTTGAAATCACATTTCATTCCTCCACTCCATTCAGATCATCAAGAAACTATGATGAAGGGAGTCAAGAATCACCTAAGGATGCCCACTGATTCAACCGCATCAGAAGCAGCATCTAAGCTGATCAATTCAGATTTTAAAGAAATCGGAGAAGCCACCAAGAAACTAGCTAATCATGTCATCAAGCTCGGAGTCAGCGGTGGTCTCCTTACCACCATCCTTCAATGGTTCGCCTGCTTTGCCGCCATTTATTTGCTGGTGCTGGATCGAACAAACTGGAGGACGAACATGCTTACTTCACTCCTGGTTCCTTACATCTTCTTGACTTTTCCTAATTGGCTCTTCGGAATTTTGAGAGGAGACATCGGGAGATGGATTACCGTCGTCGGAGTCATATTGCGTCTCTTCTTCCCTAATCACTTTGCAGATTACTTGTTGTTGCCTGGATCTTTGATCCTTCTGGTAGTGGTATCTCCTAGCTTTGTGGCTGGATACGTAAGAGATGGATGGATAGGGGTGATTATCTGCCTAGCTATTGGATGCTACCTTCTCCAAGAACACATCAGAGCTTCTGGAGGTTTCAGGAACGCTTTCACCAAAAGCAACGGCATTTCCAACACCATCGGTATCGTGCTTTTGTTCGTTTTCCCCGTTTGGGCTCTGATCGGCTTAATATAATTCAGCACCTTCTGTTGTTATTGTAGTTATAATAATTATAAGGTGTCTTGTGCTTTCTTTTTTTGTATCTATTATATATTATCATTCATCAATCCTTCCTTTTCTTCCATTTGATCCCCATCTGTAATTTGAGACCTCTTGTTTATTTGATTAGAACACCTTCATTCATTTGTAT 877 41.85 MLVVTMIPFLKSHFIPPLHSDHQETMMKGVKNHLRMPTDSTASEAASKLINSDFKEIGEATKKLANHVIKLGVSGGLLTTILQWFACFAAIYLLVLDRTNWRTNMLTSLLVPYIFLTFPNWLFGILRGDIGRWITVVGVILRLFFPNHFADYLLLPGSLILLVVVSPSFVAGYVRDGWIGVIICLAIGCYLLQEHIRASGGFRNAFTKSNGISNTIGIVLLFVFPVWALIGLI 233
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g01010 233 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 36 229 IPR008892 GO:0016020(InterPro)
Cati3g01010 233 Pfam Cold acclimation protein WCOR413 43 221 IPR008892 GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g01010 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:14114718 Cati3g01010 Cati-Chr3:14114854 tandem