Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cati3g01062	ATGTCGTCTTTCTCAGTCAAATTCCTCCCACCCAATTCATTCTTCACTCCCAAAACCACCACAGCCACCAGGCTCTATGCAAACCCATCACCAACCGCCGTCCCTGCTCCGCCTCACTCGCCGGAGGACATCGCCGCCGACAGGCTCGAACCCAGAGTCGAGAACAAAGCTGGATTCTTTGTGCTTAAAGAGAAGTTCCGACAAGGCATCAATCCACAAGAGAAGGTCAAGATTGCTGCTGAGCCCATGAAGCTGTTCATGGAGAATGGGATTGAAGATCTTGCAAAGATCCCAATTGAAGAGCTTGATAAATCTAAGGCCACTAAAGATGATGTTGATGTTAGACTCAAATGGCTTGATGGCCGGTTTATGATGAGATTGAAGCTCCCAAATGGCGTAACCACGAGTGCCCAAACCCGATACTTGGCGAGTGTCATTCGGGAGTACGGCGAGCACGGCTGCGCCGACGTTACCACCCGTCAAAACTGGCAAATTCGCGGCGTTACCCTACCCGATGTTCCGGCAATTCTCAAGGGTCTCGATGAGGTTGGCTTAACGAGTCTCCAGAGCGGTATGGATAACGTTAGAAACCCAGTGGGGAACCCGCTTGCGGGGATCGATCCACACGAGATCGTCGATACGAGATCCTATACGAACCTATTGTCGCAATTCATCACCGCCAATTCGCGAGGGAATCCGGCTTTCACCAACTTGCCAAGGAAGTGGAATGTGTGTGTGATTGGTTCACATGATCTTTACGAGCATCCGCATATCAACGATCTAGCGTATATGCCGGCCACGAAGGATGGTCGGTTCGGGTTCAATTTGTTAGTAGGAGGATTCTTTAGCCCAAAGCGATGTGCAGAGGCCATCCCTCTCGACGCATGGGTCCCGGCCGAAGATGTCGTCCCGGGTGTTGAAGGGTTTAGATCAGAAGTTGTGAAGAGAATGCCTGAGCAAGTGTTGGAGAGATCATCTTCAGAAGATCTTGTTGACCAAAAATGGGAGAGAAGGGATTACTTCGGCGTGCACCCACAGAAACAAGAAGGCCTCAGCTTCATAGGCCTTCACATTCCCGTGGGTCGTGTCCAAGCCGACGACATGGACGAGTTGGCTCGGATAGCCGAGGAGTACGGCTCAGGAGAGCTTCGGCTAACCGTGGAACAAAACATCATCATCCCAAACATAGACAACTCAAAAGTCAAAGCTTTGCTGGACGAGCCTCTTTTGAGAGACAGGTTTTTGCCCGAGCCACCAATCCTGATGAAAGGATTGGTGGCCTGCACGGGCAACCAGTTTTGCGGGCAAGCCATCATTGAAACAAAAGCTCGTGCTTTGAAGGTTACAGAAGAAGTGGGGAGACTTGTTTCTGTAACACGTCCAGTGCGGATGCACTGGACGGGCTGCCCAAACACATGCGGGCAGGTCCAGGTGGCGGATATCGGGTTTATGGGATGCATGACTAGGGACGAAAACGGGAAAGTCGTCGAAGGAGCGGATGTTTTCTTGGGGGGTAGAATTGGAAGTGACTCACATTTGGGGGAAATTTACAAGAAGGGTGTCCCTTGCAAGGACTTGGTGCCTGTGGTTGTGGATATTTTGGTGGACAAATTTGGTGCTGTTCCACGAGAAAGAGAAGAGGGGGAAGAATGAAAAGAATATTGGTGTACGGGTAAAAAGTGTACATCTAAATGAAATGGAGGGACTGTAAGTAGAGGTACAGCAAGTTTGATGTTGTTCACACTTCCACACATATATCTTTTATTTTTGTTAATTCAATAATTTAGTAGTAATAATATGTAACAATTGGGGATTCATATGATACAATATACATGCCCCCAATTTGACTTTTTGATTTTATTTTCTCTCTCATTAATAAATTACTATTTGTGTTAAAATTCTATAGATAATTTTTTGTATAATTTAAGAAAGGCT	1935	47.6	MSSFSVKFLPPNSFFTPKTTTATRLYANPSPTAVPAPPHSPEDIAADRLEPRVENKAGFFVLKEKFRQGINPQEKVKIAAEPMKLFMENGIEDLAKIPIEELDKSKATKDDVDVRLKWLDGRFMMRLKLPNGVTTSAQTRYLASVIREYGEHGCADVTTRQNWQIRGVTLPDVPAILKGLDEVGLTSLQSGMDNVRNPVGNPLAGIDPHEIVDTRSYTNLLSQFITANSRGNPAFTNLPRKWNVCVIGSHDLYEHPHINDLAYMPATKDGRFGFNLLVGGFFSPKRCAEAIPLDAWVPAEDVVPGVEGFRSEVVKRMPEQVLERSSSEDLVDQKWERRDYFGVHPQKQEGLSFIGLHIPVGRVQADDMDELARIAEEYGSGELRLTVEQNIIIPNIDNSKVKALLDEPLLRDRFLPEPPILMKGLVACTGNQFCGQAIIETKARALKVTEEVGRLVSVTRPVRMHWTGCPNTCGQVQVADIGFMGCMTRDENGKVVEGADVFLGGRIGSDSHLGEIYKKGVPCKDLVPVVVDILVDKFGAVPREREEGEE	550

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cati3g01062	550	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	192	307	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Cati3g01062	550	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	423	534	IPR045854	-
	Cati3g01062	550	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	305	434	IPR036136	GO:0016491(InterPro)
	Cati3g01062	550	Gene3D	Sulfite Reductase Hemoprotein, domain 1	419	549	IPR045854	-
	Cati3g01062	550	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	344	408	IPR005117	GO:0016491(InterPro)
	Cati3g01062	550	Pfam	Nitrite-Sulfite reductase ferredoxin-like half domain	120	183	IPR005117	GO:0016491(InterPro)
	Cati3g01062	550	SUPERFAMILY	Nitrite-Sulfite reductase N-terminal domain-like	49	191	IPR036136	GO:0016491(InterPro)
	Cati3g01062	550	Pfam	Nitrite and sulphite reductase 4Fe-4S domain	425	534	IPR006067	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Cati3g01062	550	SUPERFAMILY	Nitrite and sulphite reductase 4Fe-4S domain-like	192	308	IPR045854	-
	Cati3g01062	550	ProSitePatterns	Nitrite and sulfite reductases iron-sulfur-siroheme-binding site.	467	483	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Cati3g01062	550	PRINTS	Sirohaem Fe-binding site signature	423	441	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Cati3g01062	550	PRINTS	Sirohaem Fe-binding site signature	467	485	IPR006066	GO:0016491(InterPro)\|GO:0020037(InterPro)\|GO:0051536(InterPro)
	Cati3g01062	550	Gene3D	-	320	418	-	-
	Cati3g01062	550	Gene3D	-	48	231	-	-
	Cati3g01062	550	PANTHER	FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC	18	304	IPR051329	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cati3g01062	K00366	ferredoxin-nitrite reductase [EC:1.7.7.1]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cati	Cati-Chr3:15179380	Cati3g01062	Cati-Chr3:15179616	tandem