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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g01069 GACACTTGTCATCTCTTCCGACCCAACAAGAACGAAACGACACGCAGCTCTTCTCCATCTTCTCCTTCTCATCTCTTTCACTCTAAAAAGGAAAGCAAAGCCATAGGGATATATTGGGATTCTTTTTGAGGGGTGGTTTGAAGTGTTCTTGATCCAAGAATGAGTTCATTTATCAACTTCAAGAACTATGGTGACACATCACAACCAGACCTCAATGGCAGCAGGCAAATGGTGTCGAATTTGCCATTAGCCCGACAATCTTCCGTCTACTCGTTGACTTTTGACGAGTTACAGAACACATTTGGTGGCGGTGGGAAGGATTTGGGATCCATGAACATGGATGAACTTTTAAAGAACATATGGAGTGTGGAAGAGACTCAAGCAATTGCATCAACCTCCAATTTTGGGATAGATGGGAGTGTGCAAAGACAGGGTTCTTTGACATTATTACCAAGAACACTTAGCCAGAAAACGGTGGATGAAGTTTGGCGAGAATTGCTTAAAAGTAGTAGCAGTAACGGTGGGTTGAAAGAGGGCGAAATGATTGGAGAAGCAAATTTGCAGCCACCGCAAAGGGAAATGACTCTAGGGGAGATGACTCTAGAGGATTTCTTGATGAAAGCAAGGGTGGTAACGGAAAATAATGAAGGTCAAACGAATGGAAGAAGCTCTGGAACGTCTCAAAATGGCGCGTATTTTGGTGATGTTTCGCACCAGAATGTTGAAAATGGTAGTTTCATATTCGGGTTTCAAAACCCAAATCAGAACAACGGGTTTCAACAGCAATCAGCTCAGAACAATCGACCAATGGTTAACCAAGTCACGGAGAGTAAAAATGTTGTCAATCTGCAACCAAAACCACAGCCAGTGGCTCAACAACCACTTTTCCCAAAGCAAGCTGCTTTGGACTTCAGCGCACCATTAAACGGTCAGCTGGCTAGCCCTTGTTCTAGAGTTGGGAAATCTGAGCACCCGACAAAGACTAGTGTGGTTCAAGCCGGTGGCATAGAGAATGGAGTGATGAACATCAAGTCACTTGGTGGTCTTGGGGCGGGATCTCCAAGGAATTTGATCCCAAAATGTAATATGGACACAACCCCATCACCGCCCTTTTATGCGTTTGGGGAAGGTGGTCTTCGTGGAAGGAAAAGCAGCGGGACTTTAGAGAAAGTGGTGGAGAGAAGGCGGAGGAGAATGATCAAGAACCGTGAATCTGCAGCAAGATCAAGGGCTCGGAAACAGGCCTATACTTTGGAGCTGGAAGCCGAAATTGCAAAACTTAAAGAACTCAACCACGAGTTGCTTAAAAAACAGGCATGTCGTTCTGGCTTTTACCCGTTATCATGTTCATGAAAAAGGTTGAATCTTTGTTATTATAATATGCATTTCTTGCTAAATGGTTACCACTGCAGGAAGAGATCATGGAGATGCAGAAGAATCAGGTAGTTGAGAAGATAAATATGCCATGGGGAAGTAAAAGACTATGCTTACGAAGAACGTTAACAGGACCTTGGTAGTGTTAAGAAACAAATGATAGATTAGACGAAAAGAAATGAATGAAATGGGAGATAAAGATTTGGGTATGTTTTTTTCTTATACATATGAGATTGCAATCTTGTTAACTGCATCTGGGTGTGTATGTATAGATGACCAGATTAGCAAGCACATGATGGTGTGTGCAACTTCTTTTTGAGAGGCATCCTGTTTGTAAGTTATCGGGTTATGTAGATCAAATACAAACTTCTGTTGTATGAAATCTTTGTTTGCGTTCTTGTTTGGTTTACAGATCGTTGTAAAAGTGTTCTGGTTTCGATATCTGATTATGTTATGTTGCTGATTATACTAGTTTGATGCATTTTC 1860 42.04 MSSFINFKNYGDTSQPDLNGSRQMVSNLPLARQSSVYSLTFDELQNTFGGGGKDLGSMNMDELLKNIWSVEETQAIASTSNFGIDGSVQRQGSLTLLPRTLSQKTVDEVWRELLKSSSSNGGLKEGEMIGEANLQPPQREMTLGEMTLEDFLMKARVVTENNEGQTNGRSSGTSQNGAYFGDVSHQNVENGSFIFGFQNPNQNNGFQQQSAQNNRPMVNQVTESKNVVNLQPKPQPVAQQPLFPKQAALDFSAPLNGQLASPCSRVGKSEHPTKTSVVQAGGIENGVMNIKSLGGLGAGSPRNLIPKCNMDTTPSPPFYAFGEGGLRGRKSSGTLEKVVERRRRRMIKNRESAARSRARKQAYTLELEAEIAKLKELNHELLKKQACRSGFYPLSCS 397
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g01069 397 Coils Coil 360 384 - -
Cati3g01069 397 SUPERFAMILY Leucine zipper domain 341 387 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cati3g01069 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 344 359 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cati3g01069 397 SMART brlzneu 337 389 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cati3g01069 397 Gene3D - 339 389 - -
Cati3g01069 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 339 384 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cati3g01069 397 Pfam bZIP transcription factor 341 384 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cati3g01069 397 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 385 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cati3g01069 397 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 339 391 - -
Cati3g01069 397 CDD bZIP-plant-BZIP46 346 387 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g01069 K14432 ABA responsive element binding factor
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Event-related genes

Select Gene_1 Gene_2 Event_name
35679 Cati3g01069 Cati7g02841
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:15387747 Cati3g01071 Cati-Chr3:15387753 dispersed
Cati Cati-Chr3:15387747 Cati3g01070 Cati-Chr3:15387753 tandem
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cati10g00187 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 53.016 6.51e-90 268.0
Cati10g00254 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 62.763 1.62e-138 400.0
Cati10g00255 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 63.063 1.74e-138 399.0
Cati10g00293 . 29 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 48.63 6.09e-168 497.0
Cati10g01605 . 16 272 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.083 5.78e-76 234.0
Cati10g03080 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 47.239 9.10e-64 202.0
Cati10g03305 . 217 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 53.623 3.23e-15 70.1
Cati11g00345 . 70 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 44.578 9.19e-17 72.0
Cati11g00613 . 53 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 66.087 2.06e-48 154.0
Cati11g01034 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 52.825 2.75e-107 315.0
Cati11g01200 . 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 46.301 6.86e-96 299.0
Cati11g02303 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 61.407 0.0 596.0
Cati11g02304 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.345 0.0 577.0
Cati11g02855 . 1 134 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 67.164 7.75e-42 135.0
Cati12g00177 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 38.362 1.00e-73 233.0
Cati12g00178 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 38.362 1.00e-73 233.0
Cati12g01488 . 184 235 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 46.154 2.76e-06 46.2
Cati12g02537 . 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 56.869 2.44e-99 292.0
Cati1g00275 . 15 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 56.863 4.05e-48 153.0
Cati1g00465 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 36.709 2.93e-22 86.3
Cati1g00614 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.874 5.86e-115 336.0
Cati1g00681 . 31 111 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 56.79 1.76e-26 97.1
Cati2g00560 ACH 1 372 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 62.032 1.54e-146 419.0
Cati2g00687 . 234 310 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 40.26 4.31e-10 53.5
Cati2g00688 . 221 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 47.059 7.32e-15 66.6
Cati2g00689 . 221 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 47.059 7.32e-15 66.6
Cati2g00690 . 221 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 47.059 7.32e-15 66.6
Cati2g01512 ACH 12 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 46.403 1.30e-113 345.0
Cati2g01513 ACH 12 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 46.403 1.30e-113 345.0
Cati2g01565 ACH 1 242 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 57.414 1.41e-94 276.0
Cati2g02200 . 7 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 58.316 9.97e-163 465.0
Cati2g02201 . 7 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 59.827 2.51e-164 469.0
Cati3g00418 . 1 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.824 2.08e-99 295.0
Cati3g00417 ACH 1 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.824 2.08e-99 295.0
Cati3g00462 ACH 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 27.451 1.98e-16 74.7
Cati3g00906 ACH 18 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.909 3.09e-42 137.0
Cati3g01070 ACH 1 454 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34000 37.996 1.11e-73 235.0
Cati3g01069 ACH 1 358 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 44.717 2.20e-77 243.0
Cati3g01071 . 1 358 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 44.717 2.20e-77 243.0
Cati3g01072 . 1 358 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 44.717 2.20e-77 243.0
Cati3g01537 . 91 268 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 42.439 3.04e-33 120.0
Cati3g01631 . 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 54.444 8.66e-24 98.6
Cati3g01945 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 40.343 1.21e-35 126.0
Cati3g03246 . 62 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 54.148 1.58e-64 203.0
Cati3g03346 ACH 1 374 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 64.103 1.33e-162 462.0
Cati3g04050 . 115 468 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 35.068 1.56e-29 117.0
Cati3g04075 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 74.32 4.24e-176 489.0
Cati3g04176 . 113 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.984 2.86e-18 81.6
Cati3g04219 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.359 1.23e-152 437.0
Cati3g04218 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.359 1.23e-152 437.0
Cati4g00103 ACH 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 65.678 7.56e-106 306.0
Cati4g00245 ACH 1 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 57.968 0.0 530.0
Cati4g00549 . 1 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.147 3.15e-91 273.0
Cati4g00991 . 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 32.867 5.02e-26 105.0
Cati4g02466 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.757 8.09e-103 310.0
Cati5g00958 . 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 30.961 1.47e-26 106.0
Cati5g01377 ACH 23 142 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 58.333 8.67e-43 139.0
Cati6g00189 . 39 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 35.433 1.55e-16 69.7
Cati6g01213 . 45 290 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 58.301 2.46e-90 272.0
Cati6g02859 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 51.74 5.09e-116 342.0
Cati6g02985 . 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 47.181 5.08e-75 232.0
Cati6g04075 . 7 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 52.018 4.78e-116 343.0
Cati6g04234 . 16 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.689 5.77e-38 125.0
Cati7g00757 . 4 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 43.03 2.47e-33 115.0
Cati7g01738 . 1 364 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.377 4.10e-112 328.0
Cati7g02841 ACH 1 454 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34000 42.585 6.22e-89 274.0
Cati7g03209 ACH 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.941 5.66e-12 65.1
Cati7g03246 . 1 148 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 38.065 2.12e-20 90.9
Cati7g03249 . 1 148 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 38.065 2.10e-20 90.5
Cati7g03247 . 1 148 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 38.065 2.63e-20 90.1
Cati7g03248 ACH 1 148 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 38.065 1.55e-21 89.7
Cati8g00401 . 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.145 6.98e-113 331.0
Cati8g01200 . 190 294 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 43.81 3.53e-17 79.0
Cati8g01199 . 190 294 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 43.81 3.53e-17 79.0
Cati8g03833 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 76.133 0.0 501.0
Cati8g04003 . 147 468 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 32.222 7.06e-37 138.0
Cati8g05048 . 43 258 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 35.321 1.59e-17 78.6
Cati9g01087 . 9 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.5 5.20e-49 154.0
Cati9g01254 . 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 50.885 1.46e-113 338.0
Cati9g03794 . 1 441 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 47.072 6.00e-100 303.0
Cati9g03991 . 22 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 50.112 1.61e-129 381.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Cati bZIP_1 1.2e-10 CL0018 TF bZIP