Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g01082 | GTAAACCATGAAACTTTTGTGTCGCCGGGTGGTACTAAGTATTGGGTTCCTACTGTTTTAGAAGATGTGAAGCTAGCAGCGGATGATAAATTTTATTCAATTGAGGAAGCTGACTCCAGAATATTTATTATCATAATCAAACTTGGATGCAATGTCTTCTTCTCAACTCTCTTCGCCACGCTTGTCCTCTTCACCTACGCTTATGCACTCAAGGAAGGACAAACGTGCGTAAATAATAACAACTGTGACTCAGGGTTACATTGTGAGGCTTGCGTAGCAGATGGCAATGTTCGTCCTCGCTGTACTCGTATTCAACCTCTAAATCCTCTATCTAAGGTGAAAGGATTGCCATTCAATCGGTACTCGTGGTTAACCACGCACAATGCGTTCGCTAAATTGGGAGACAAGTCCGCTACTGGCTCTATCGTTCTCGCTCCCACGAACCAGCAGGATTCTGTTACTTCTCAGCTTAATAATGGTGTGAGAGGACTGATGCTTGATTTGTATGACTTTGAGAATGACATTTGGTTATGTCATTCCTTTGGTGGCAAATGCTTCAACTACACAGCTTTTCAACCCGCTATCAATGTACTGAAAGAGGTTCGAGATTTCCTAGAAAAGAATCCTACTGAAATCGTGACAATAATCATTGAAGATTACGTTACTTCTCCAAATGGTCTAAGCAATGTATTCAACGCTGCTGGTTTGAGGAAATTCTGGTTTCCAGTAGCTCGAATGCCAAGTAATGGTCGTGATTGGCCTACAGTTGACTCCATGGTTCGACAGAATTTCCGCTTGGTGGTTTTCACCTCCAAATCTTCTAAAGAGTCGTCGGAAGGGATTGCATATGAGTGGAAGTACTTGGTGGAGAACCAATATGGAACTGATGGGATGAAAAGTGGTCTATGCCCTAATCGTGCGGAGTCTGCTGCTATGAACACTAAATCTAGATCACTGGTTTTAATGAACTACTTTCCAGATACACCGGATATCACCCAGTCTTGCAAGCACAACTCAGCCCCATTAATAAGCATGATGAACACATGTCATGACTTAGCCGGTAAACGGTGGCCTAATTTCATTGCTGTTGACTTTTACAAGAGGAGCAACGGTGGAGGTGCACCTGCTGCCGTGGATATGGCAAATGGACAGCTAGTTTGTGGCTGTAACAGCATTGCAGTATGCAGGCCAAACATGACGTTTGGTGTCTGTAACCTCCCGGAGGCGGCGGCTGCTCCAGCCCCAACTACAGCAGGGAGAAGCACGATGAACACGGGTAGTCAAGTGGTTCGGTTTGATTGGTTGTTTGGTACAGCTTAC | 1320 | 44.62 | VNHETFVSPGGTKYWVPTVLEDVKLAADDKFYSIEEADSRIFIIIIKLGCNVFFSTLFATLVLFTYAYALKEGQTCVNNNNCDSGLHCEACVADGNVRPRCTRIQPLNPLSKVKGLPFNRYSWLTTHNAFAKLGDKSATGSIVLAPTNQQDSVTSQLNNGVRGLMLDLYDFENDIWLCHSFGGKCFNYTAFQPAINVLKEVRDFLEKNPTEIVTIIIEDYVTSPNGLSNVFNAAGLRKFWFPVARMPSNGRDWPTVDSMVRQNFRLVVFTSKSSKESSEGIAYEWKYLVENQYGTDGMKSGLCPNRAESAAMNTKSRSLVLMNYFPDTPDITQSCKHNSAPLISMMNTCHDLAGKRWPNFIAVDFYKRSNGGGAPAAVDMANGQLVCGCNSIAVCRPNMTFGVCNLPEAAAAPAPTTAGRSTMNTGSQVVRFDWLFGTAY | 440 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g01082 | 440 | PANTHER | UNCHARACTERIZED | 79 | 395 | IPR051057 | GO:0008081(PANTHER) | |
| Cati3g01082 | 440 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 117 | 225 | - | - | |
| Cati3g01082 | 440 | SUPERFAMILY | PLC-like phosphodiesterases | 112 | 386 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Cati3g01082 | 440 | CDD | PI-PLCc-At5g67130-like | 108 | 382 | - | - | |
| Cati3g01082 | 440 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 107 | 374 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g01082 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 35682 | Cati3g01082 | Cati5g01258 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr11:4589960 | Cati3g01082 | Cati-Chr3:15568456 | dispersed | |
| Cati | Cati-Chr11:4634639 | Cati3g01082 | Cati-Chr3:15568456 | dispersed | |
| Cati | Cati-Chr3:15568456 | Cati8g02154 | Cati-Chr8:17921655 | dispersed | |
| Cati | Cati-Chr11:7601283 | Cati3g01082 | Cati-Chr3:15568456 | transposed | |
| Cati | Cati-Chr3:15568456 | Cati5g01258 | Cati-Chr5:14936921 | wgd |