Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g01099 | TTTAAAGTCAACACAATTTTGAAGGGTATAAAGGGAATTGCATACATTGTGCTCTCACAAAAACTCAACTTCAATTTTTCCATCTATACTATTTCACCTTCAACTCATCACCATTCTCCAATGACCAGTAACGGCATCCATGGCAGTCTCCTTGAAGTCACTGTTGTAAGCTGCACTAATCTCAAAGACACCGAGTGGATCTCACGCCAAGATCCTTACAACCCTGCGTTCCAAGAGAAATTCGTGTATAGCCTAGTTGAAGGACTAAGAGATTTGAACATTGCGGTTTGGAATAGCAATACCATCACACACGATGACTTGATCGGTACCGGAAGCTGGCCATTGCAGAGCAAAACTGGCAGGCATGCTGGAGAAGTTCGATTGATAATGCATTATTCCAATGCCAATAAACCGGCAAAAGATATGTATGCTCAAAAACCAGGAAAAGGATTTGCTCCATCAGCTCCTCCGTACGTAACAGACAATGCATCCCCGGCGTATATGTATGCCGCCGCACCACCACCCGCAGCATCTTATCCGCCATCTCCGTACCCATCTTGCTGTATCTAA | 570 | 44.39 | FKVNTILKGIKGIAYIVLSQKLNFNFSIYTISPSTHHHSPMTSNGIHGSLLEVTVVSCTNLKDTEWISRQDPYNPAFQEKFVYSLVEGLRDLNIAVWNSNTITHDDLIGTGSWPLQSKTGRHAGEVRLIMHYSNANKPAKDMYAQKPGKGFAPSAPPYVTDNASPAYMYAAAPPPAASYPPSPYPSCCI | 189 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g01099 | 189 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 50 | 146 | IPR035892 | - | |
| Cati3g01099 | 189 | Gene3D | C2 domain | 74 | 150 | IPR035892 | - | |
| Cati3g01099 | 189 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 74 | 180 | IPR052981 | - | |
| Cati3g01099 | 189 | Pfam | C2 domain | 72 | 117 | IPR000008 | - | |
| Cati3g01099 | 189 | CDD | C2 | 51 | 117 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g01099 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 35687 | Cati3g01099 | Cati5g01235 | |
| 35688 | Cati3g01099 | Cati7g02808 | |
| 35689 | Cati3g01099 | Cati7g02822 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:16032679 | Cati7g02822 | Cati-Chr7:63384232 | dispersed | |
| Cati | Cati-Chr3:16032679 | Cati5g01234 | Cati-Chr5:14475259 | wgd |