AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati7g00437 CAGAAAAAATTATTTATTTAGCAAAAGAGAAAAAATTAAAAAAATAAAAATAAGAAATCAGTGTGTGAGAATTGAGGAAAAAAAAGCAGAGAATAAAAAGGAGACCGGATGTTGACAAATTTCATGTCACTGTTCTTAGAAGGTCGTTTGTTTGTGTGAAGATTTCTTATCTGGGATCTCTCTCTCTTTCTCTTTCTCTTTCTCTCTCTAAAAATCTCTTTCTCTCTCTAAAAAAAATAAACCTTCCTTTCTTTCAGAGAGAGAGAGAGACCACTGGCCCAGCAGATCGAAAATTTTTCCACATACCCATCAACTGATTATGATGATCTAAGCTCCTTCAATGGCAGTTTATGAATCTTTTTCTTTTATTGTTTTTATTAACAATTATTAATTGTTAATTATTAGTTATTTACACCTGTCTATTTTGGGTTTCAAGATTCTTGAGTTTTGTTATTATTATTGGAAGTGGAAGAAATTGTTGTTGAATTCTTGAAGCAGAGGCCAAATAAGGATGTGGGTCTAAGGTATGGGAACAGAAGTACAGTCGAAAAGCTCTTTTGAAGGGTATTACTCCATGAGGGATGTTAACGAGGATTCCAATAGTAGTAGCTGGCCTCTCTTTTATGGGGAAAAAGCTTTGACTAATGGTCATTATTACAACGGTTTCATACCAAGGTCGACCATTGCAGATGCACATCCGGGGTATGACAAGGATGCATTAAAACAAAAAATGCTTGAGCATGAAGATATCTTCAAAAAGCAGGTTTCCGAACTTCATCGTCTTTACAAAAGACAAAGAGACATGATGGAAGAAGTCAAACGGAAAGAGTTCCATAAGCATCGGATTTCTAATGATGCTTCATCGTCTTCGAGTCTCTTACCATCTCAAAAGCCCTACGACAAATGGCAAGTACCGAGCTTCCCGTTGGCCAACTCCACTTGTGCTAGACCCTCCATTTTCGGAGCAGAGATAAGCAACAATTCTCCGTTAAGTTGTTCAAAAGGGAATAATAGCTCAAAAGATTGTGAAGTCGTGGAGTGTAGACCTTCAAAAGTCCGAAAAAAGCTATTCGATCTCGAACTCCCCCCGGATGAGAACGCTGACCACGAAGAACACGAGCAAATCCAATGTAAGCAGGCTTCAGAAGAATCGAGTTATAAAGCTACTTCATCTGGTCAACAGTTTAGGGGGTCTAACGGATTGGCTGATCTTAATGAACCCATTCATGTTGAAGAAGCAACCGGTCAACCGTCGGTTGATGGTCTTAAACCAATGGTATCACAGTTTCTTGGCCCGACCCATGAGTTCTTTGAGAAGTCTCAAAATGGACGTCCTAGTGGGCCGTTTAACCCTTCAGCGCTCGAGGGAAAAGGCAATGGAAGAGATTGGTTGTCCAGTACACGTGAAACAGGGAATAATAGAAGCAATATGAGCTTCACACCAGGGACTTATTCGGAAATTTCCACAAGAATCCAAGATCATTCCCGTTTTAATCAAAACCCTTTGCCTTTTGCCACCTCACGTACGTCTGGTTCATACCCGTTCGTGAATTCCTCAGATTTGGGAAATTCTTGGGGAAAGCCGAACGGTAGTTTGACGCATAAGTTGACTTCATTTCAGAAACAACCGTCTTTTCCATCATCTCCTCAAAGCCATGCGGTTTTTGGAGACAAATGGCGTACAAATGGATGTTATACCCCAAATGGTATCTATCGAGGGTCGTCATCTGGGTCGAAAGAACCATTATCCCGCTTGCTATCTGGTGGTTTTGATAACCGAAACTGCAATAATCTTGAAGAAAGATCGCAAAAGATCTTTAAAGGTTCGAACTTTATCGATTTGACGGATACTGCGAAAGGTATGGATTTGAATACCGTTGAAACCGTGTCGAATGACGATAATCGTGCAAGAAACGGCAATCAATCGGTGATGCCGTGGCTTCGAGCCACGCCAGCTGTCGGTAAAAATGAGATACTTTGTGATCAGTCGAAAAACGGGGAGAAAGGTGATTCTTTGGGTAATAACGGAAAGATTCTCGGCTTTCCTGTTTTTGGGAATTCTTGCATTTCGAAAAACGATTCTTCGTCGCTTGTTTCCACCTCAGCGTCCCTTCGTTGCCCTCCCGAGAACGGGAAAATAAAGACAGAAATCATGGAACATAGAGGATTCGACATAAATGTCGCTTGGGATGATCCGGAAAACATGCAGATTGATCCGGAAACGGAAGCTTCTAATCTCGAGAAAGAAACCGATACGGAAATCGAGAAAATCAAGAACCATTTTGACTTGAATTCATGTGTGACTGAGGACGAAGATTTTCTAGTACCGGAGTCCGTTAAAAGCCCTAGCGAGAAAATTAAGAAAACAATCGAGATAGATTTAGAAGCTCCTGCTGTTCCGGAAATCGAGGAAGAAACCGCCATCAATGAGGTCGAGAAATCCGATGTTTCTGAAGACGAACAAGTGCTTGCAAAAGTGGCAGCTGAAGCAATACTCGAGATATCCGGTCAGCAAGATGAAGCAGGACCCATGTCTGATGTGGCAGTCCGCTCTGATGATGACAACAAGCGCCTTTTATGGTTCGCGAAAGTCATTGAAAACGTGGGTCCCGTCTCGAACGAGTTGGACGAATTCGAGGAGTTGACTTTGAAACTAGAGGAGACTAAAGAAGAAGATTACATGCCGAAGCCTCTGGCTCCTGATTTCCGGGAGCCCGAGGAGGCGGGTCCGTCGACGGGCCCAACCCGGCCCAGAAGAGGTCAAGCCCGGCGAGGTAGGCCCCGGAGGGATTTCCAAAGGGACATCCTTCCGGGCTTGGTGTCTCTTTCGAGGCACGAAGTGACCGAAGATCTTCAAATATTCGGCGGGATGATGAGAGCCACGGGGCATTCGTGGAACGTAGGATTGACGAGAAGGAACGGAACCCGAGGGAGGCGGAAGGCCGTGGCGGTGGCGGTGGAGCCGCCTCCTGGCGCCACCCCACCACCGCCGCCACCGCCTCCTCCGCCGCCACCGCTGCCGCTGTTGTCGGAGCAGCTTAACAACGTGGAGATGGTGGGATTGGAGGAGAGAAGCTTAACGGGATGGGGGAAGACAACGAGACGTCCCCGGAGACAACGATGTGCTGCGGGGAGTTCGGTGGTGGTCCCGTTAACGTAATTTTTGTGCATTTTATTGTTATTGTTATTATTATGATTATTATTATATCTACATGAACTCTGAATTACAGAGGGAGGTAAAGCAATTTAGGGAAGCTGATTTATGGCTTGTTGAGAGTGAAAATTGTTGTGGGGATTTGCCATTGTACATGTCTTTCTGTCATATCCCGAAACCCGGGTCGACCCGACCCGATTGATGTTTGTTTGTTTTTCGTTTTGCTAACTTGGTATCATTTGGATATTTTGTCTTGGTCTCGGATTTGATCTTGTTGATACCTAGTTCTTTTTTA 3449 43.98 MGTEVQSKSSFEGYYSMRDVNEDSNSSSWPLFYGEKALTNGHYYNGFIPRSTIADAHPGYDKDALKQKMLEHEDIFKKQVSELHRLYKRQRDMMEEVKRKEFHKHRISNDASSSSSLLPSQKPYDKWQVPSFPLANSTCARPSIFGAEISNNSPLSCSKGNNSSKDCEVVECRPSKVRKKLFDLELPPDENADHEEHEQIQCKQASEESSYKATSSGQQFRGSNGLADLNEPIHVEEATGQPSVDGLKPMVSQFLGPTHEFFEKSQNGRPSGPFNPSALEGKGNGRDWLSSTRETGNNRSNMSFTPGTYSEISTRIQDHSRFNQNPLPFATSRTSGSYPFVNSSDLGNSWGKPNGSLTHKLTSFQKQPSFPSSPQSHAVFGDKWRTNGCYTPNGIYRGSSSGSKEPLSRLLSGGFDNRNCNNLEERSQKIFKGSNFIDLTDTAKGMDLNTVETVSNDDNRARNGNQSVMPWLRATPAVGKNEILCDQSKNGEKGDSLGNNGKILGFPVFGNSCISKNDSSSLVSTSASLRCPPENGKIKTEIMEHRGFDINVAWDDPENMQIDPETEASNLEKETDTEIEKIKNHFDLNSCVTEDEDFLVPESVKSPSEKIKKTIEIDLEAPAVPEIEEETAINEVEKSDVSEDEQVLAKVAAEAILEISGQQDEAGPMSDVAVRSDDDNKRLLWFAKVIENVGPVSNELDEFEELTLKLEETKEEDYMPKPLAPDFREPEEAGPSTGPTRPRRGQARRGRPRRDFQRDILPGLVSLSRHEVTEDLQIFGGMMRATGHSWNVGLTRRNGTRGRRKAVAVAVEPPPGATPPPPPPPPPPPPLPLLSEQLNNVEMVGLEERSLTGWGKTTRRPRRQRCAAGSSVVVPLT 877
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati7g00437 877 MobiDBLite consensus disorder prediction 186 226 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 713 756 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 713 728 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 150 169 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 288 308 - -
Cati7g00437 877 Coils Coil 80 100 - -
Cati7g00437 877 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 17 866 - -
Cati7g00437 877 Pfam Plant protein of unknown function (DUF863) 498 866 IPR008581 -
Cati7g00437 877 Pfam Plant protein of unknown function (DUF863) 139 214 IPR008581 -
Cati7g00437 877 Pfam Plant protein of unknown function (DUF863) 208 311 IPR008581 -
Cati7g00437 877 Pfam Plant protein of unknown function (DUF863) 310 481 IPR008581 -
Cati7g00437 877 MobiDBLite consensus disorder prediction 847 877 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 813 834 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 186 203 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 812 835 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 102 122 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 204 225 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 150 165 - -
Cati7g00437 877 Coils Coil 696 716 - -
Cati7g00437 877 MobiDBLite consensus disorder prediction 261 308 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati7g00437 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35343 Cati2g01862 Cati7g00437
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr2:25556027 Cati7g00437 Cati-Chr7:4097827 dispersed
Cati Cati-Chr2:25556230 Cati7g00437 Cati-Chr7:4097827 dispersed
Cati Cati-Chr7:4097827 Cati8g01986 Cati-Chr8:16532919 dispersed
Cati Cati-Chr7:4097827 Cati8g01984 Cati-Chr8:16532720 transposed