AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati7g00461 AGTTTCATATAAAACATGTTAATTTCACCGATCTCACAGAAACAGACTAGTCTCACGCGAACCTGATAAATTCAAGACCGCATAAATTTCATATATACAAAATTAAAATTGTATAGTGTTATAGACTCTCAACTATATATCTGACGCCCCCCTTCCTTTATTTATTTTTTTGTATTTGAAAGAGCCATGTGATTCTTGCCCCTACGTATCAAGCTGCATCTTCTCCTTCGTCTGCTACCGGCCATCACTGATCTCCAGCTTTAGAAATCTTTCTAAATTCGGAAACTCAATATCATGTTCAATATCGCCGCCATAACCGCCGCCTTTCCGGCCATGGGAATACTCCCCATTTCCGGTCGGAAAACGTCGCCGTTTCTTGGGGCCTCCGCCGACGTTTTCCCGCCGTTTCTGCTCAAACAAATGGAGAAAATCCAAGACCCGTTTGCCCGAAAGCTGGTTTCAAGGATCGAAATGCTGCCCGTAGAGCCAATGGTACAGGAGACAGCCAATCCACTTGTTCTGCTTCATGGCTTTGACAGTTCGTGTTTAGAATGGAGATACACGCTCCCGTTGCTTGAACAGGCCGGTTTCGAGACATGGGCAATCGACATCCTAGGATGGGGCTTCTCCAACCTAGTCGGTCCAAGTCTTGGAGCTGCGGTTGCAATCGACTTTGCCATCCACCATCCGGAAGCTGTTGATAAGCTGATTTTGATTAATGCAAGTGTGTATGCAGAAGGCACAGGAAACCTCTCTAAGTTACCGAAAAGTCTAGCTTATGCTGGAATTGCACAATTACATTGTCTATTACCATGGTGGAAAGATGCAACAGTTGATTTTATGAGCAGTGGGGGATACAATGTCTCTGCTCTTATTAATCAGCGGTTGCATTGTGAGCTCCGAAATGGGATCATTCGACGTATACCGAATTGCGGTCACATCCCACATGTCGAAAAACCGCAGGCGGCCGCAGCCTTGATCACGGAGTTTGTGCCATGCGAGCCACGCTACAATCTTCCCAAATTACGTGAGCAGGAGGAAAAGATCGTGGTTCGTCCATTCTAGTAGCTCGTTAGCTTCCTCATATCGGGAGTTTGTATTGTATCGTGTTGTGTCATGGATGCATGTTGATCGAACCTTTTGTGAGCCTATATATGTTACAAATGTTTAATGGTGTTGGTTACTGAAAACGCCGATCTAATACATATTGAATTCGAAATTACATTGTAAGTTTAACCGTTATCGAATTCAACGAGTTTGTACAAATGCGTTCAAAAAGAGTCTAAAAGAATAGATTCAAGGGGTGT 1307 43.99 MFNIAAITAAFPAMGILPISGRKTSPFLGASADVFPPFLLKQMEKIQDPFARKLVSRIEMLPVEPMVQETANPLVLLHGFDSSCLEWRYTLPLLEQAGFETWAIDILGWGFSNLVGPSLGAAVAIDFAIHHPEAVDKLILINASVYAEGTGNLSKLPKSLAYAGIAQLHCLLPWWKDATVDFMSSGGYNVSALINQRLHCELRNGIIRRIPNCGHIPHVEKPQAAAALITEFVPCEPRYNLPKLREQEEKIVVRPF 256
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati7g00461 256 PANTHER HYDROLASE 196 233 - -
Cati7g00461 256 Gene3D alpha-beta hydrolase 188 234 IPR029058 -
Cati7g00461 256 SUPERFAMILY alpha-beta-Hydrolases 58 233 IPR029058 -
Cati7g00461 256 Gene3D alpha-beta hydrolase 114 185 IPR029058 -
Cati7g00461 256 Gene3D alpha-beta hydrolase 55 113 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati7g00461 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
35347 Cati2g01900 Cati7g00461
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr2:26187703 Cati7g00461 Cati-Chr7:4289374 wgd