AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati7g00464 CCGATCGATCCGTTAGAAAAGAAAAATCTGCCGAAGAAGACGATCGATCGATCATTCGGCGGCCATGGAAGAAGAGCTCGACAAGGTGAAGAAGTCTCCAGTTATAGTTGAGGAATGGAGCGGCTCTTCTTCGAGCAAGCTCTCGCTGACCGCTGTCATATCTCCGTCGTCTTCATCTCCTTCGTCTTTCACCTTGAAGAGACACGGCAATCGATTCAACATTTTCTCCCGAAGGTTTCTCGAAGCGTTTGTTCCCGAGGGGTTTCCAAGCAGCGTGACTCCAGATTACATTCCTTTTCAGACATGGGACTTATTGCAGGGCCTCTCAACATACATAAGGACCATGCTTTCTACACAAGCTCTTTTAAGTGCTATAGGAGTCGGAGAGAAATCAGCAACTGTGATTGGGGCTACTTTTCAGTGGTTTTTGAGGGATTTAACTGGAATGCTTGGAGGTGTCATGTTCACTTTCTACCAGGGCTCAAACCTAGACAGTGATGCCAAAATGTGGCGTTTGGTTGCAGACCTAATGAATGATCTTGGAATGCTGATGGACCTTCTTTCTCCATTGTTCCCTTCAGCATTTATATTCATTGTCTGTATAGGGAGCTTGTCAAGATCTTTCACAGATATATCTGCAAAGGAAGGAAGCCAGGAGACAGTTGCAACAATGATGGGAATGGCTTTAGGAATGCTTCTTGCTCACATTACAATGGGACACTCGATGATCATATGGTTCTCTTTTCTGTCACTCACCATGTTCCACATGTATGCTAATTACAAGGCTGTTAGGTGTCTTAATCTGACTACATTAAACTGTGAAAGAAGCTCAATTCTTTTACTGCATTTCATGGAGACTGGCCGAGTTCTCTCTCCAAAAGAGGTCTCAGTCTTGGAGCACGTCTTACCGTTATGGATAAGTTCTTGGAGCTCAAAGCGCACCAAACTCTTGTATGCACGGGTACGCTTAGGTGTGAGGGTTTCCTCACTTGACAGCCTGGAAATGATGGAGTTACTAAGTTCTGCTGAATCTCGATATGAGAAAGCAAAATACATGCTACTTGAGAAGAAGGGAATCATCAACGTTGTTATGCATAAAGATTCAACTACTGGAGATGTCTTGCAGGGGTTCATGCATGCTCTTGTTATGGCAAATTTTCTAGATGATAAGCCTACTTCATTACATGTGGATAGCCAAACATGGATGGACAAACACTATGAAGCCTTTGTTTTGAAGCTTCAGTCATCTGGTTGGAAAACGGAGCGCCTTTTGTCGTCATCAATCATCTGGAGGGCAAACTGGAGCCATGGGACTCCAGATAAGAAGATAGACTAGAAGAAAATCACCTATACCATCATACAGACAAAATTCAATGATTTCCTCGCTCTGAAGGATGAAAATGGAAAGACGGTCAATTAATTCAGATGACGCCATTAGAACTCCAACAGCCACAATAAACATGGATAGCATGCCTGCAAGCAATATATACGTTCTCCTGGACGATTTTCGATATTCACCAAAAAATAGCACACCCCAAAAGGTACTCACGAGTGGAAGCGCCTGAAATGAGTTCACAACAAGCTCATAAGGTAATCATAAACAACAGACTTCACATTTTATCCAAATGCATTGATGGGTTGTACAGTACAACTCAGTTTTGCATCCCGGCACTACTCACTACTCAGCATTGCTGGGAAGTGTTTAGAAGTGGAACTAGATGTATAAATGAGCTGTAAACAAGAACCTACCAATGCATCTTATCAGCCAGAACTCACTGTATAATCTTTTGAATCAAATGCATTACATAGTTGTACTATGTAGTACAAGAATGCATGATATTCGCTACAAGATGAGTAGCACACTAGGACCAAGCAATGCATTATTTCTAGATATCACGCAGTAAGTAATGTCGTGAATCAAGT 1923 42.43 MEEELDKVKKSPVIVEEWSGSSSSKLSLTAVISPSSSSPSSFTLKRHGNRFNIFSRRFLEAFVPEGFPSSVTPDYIPFQTWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVMFTFYQGSNLDSDAKMWRLVADLMNDLGMLMDLLSPLFPSAFIFIVCIGSLSRSFTDISAKEGSQETVATMMGMALGMLLAHITMGHSMIIWFSFLSLTMFHMYANYKAVRCLNLTTLNCERSSILLLHFMETGRVLSPKEVSVLEHVLPLWISSWSSKRTKLLYARVRLGVRVSSLDSLEMMELLSSAESRYEKAKYMLLEKKGIINVVMHKDSTTGDVLQGFMHALVMANFLDDKPTSLHVDSQTWMDKHYEAFVLKLQSSGWKTERLLSSSIIWRANWSHGTPDKKID 423
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati7g00464 423 Pfam Vitamin B6 photo-protection and homoeostasis 55 187 IPR054549 -
Cati7g00464 423 Pfam Vitamin B6 photo-protection and homoeostasis 188 265 IPR054549 -
Cati7g00464 423 PANTHER RUS1 FAMILY PROTEIN C16ORF58 12 187 IPR006968 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati7g00464 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr7:4334513 Cati7g00466 Cati-Chr7:4336039 dispersed
Cati Cati-Chr7:4330972 Cati7g00464 Cati-Chr7:4334513 tandem
Cati Cati-Chr7:4334513 Cati7g00465 Cati-Chr7:4334513 tandem