AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati7g00471 ATGGACTTCTGGGTGGTTGCAGCCGCTACCGGTGCCGGTTATGTGGCCAAGCACTTGCAGAGCTTATCGGGTGACAAAGATGGCTCATCGAACCAGTCACCTATGCCATCACCGCGACTACAATCACAACCATGCCGAGCTTTCAGCAAAATCCCCAGCTCGGTTTTCCCACCGCCAGCTTCCGGTCTAGCTCCGGCCTACATCGAGAAACAAATTCTTCAAGACGATCCCGATGAAATCAACGAAAAGCACGACTACTTTGACACTTCAGGCCATCATTTACAAGAATTCAGAACCAATAACACGAATGCCATATCGTTCTCAACTCTGAGACCCTTGGTAGCAACCAGTAACGGTAGAGATTCTGGGCAGAAAAAAATGACAAAACTTGACGATAGGAAAGACCGTAAGATCGTGTTCATGAAAGAAATTGGAGCATCGGTGGAAGCATCACTCCTTGAACCAGATGGATCAGTGAAGCTTCCAAGAAAACCAAAACAAATGCATGTCACGAAATTTGCAACAGGTAGCGATATCGTGCCATTGTTCCTCGGGATCACGATCGGGATATTGTCGACTATTGTGAGTAATCAACATGAAGTCGACCATCTGAACGAGCTACTAGAAGAAGCCGAAGGTATGGTTCGAGATTTACACAACAAACTTGAAAAGAAAGATGGGATTACCAACACGGAGCATGGCAGCGAGGCAATTGAAAATGCAACCGAAAGTCCGAAAGCCGACAACTTTGAGTTAACAAGTGACATCGAGGCAGAGCTTGAGGCCGAGCTTGTGAGATTGGAACAAAATATGACTAACATTATGGAGGTTGACTCAGACATTGAAGCAGACATGGCTAAAGGAGACTTGAACCTGGATTCTGTCACCTGGCAACTTGATAGCCGAACTGAATCGGACCACGGTGACAACAACGAAAGCACCAGCAGACCCGTTTTCACTCCAAACTACACAGTTTCGCCACTGGACTTACGGCTACGCCTTCACGAACTAATCGAGTCGGAACTACGGGCCCGTATCGAGGAGCTCGAGGCTGTCCTCGAGAACCAAAACGGCCAAAGTAAGCCTCATTCTCCACAATCACAAGAAGAAAACTCTTTCTGGGACTTCGATCACACCAGAATCGAATCTTCTTCATCGACCCCTTAA 1167 47.22 MDFWVVAAATGAGYVAKHLQSLSGDKDGSSNQSPMPSPRLQSQPCRAFSKIPSSVFPPPASGLAPAYIEKQILQDDPDEINEKHDYFDTSGHHLQEFRTNNTNAISFSTLRPLVATSNGRDSGQKKMTKLDDRKDRKIVFMKEIGASVEASLLEPDGSVKLPRKPKQMHVTKFATGSDIVPLFLGITIGILSTIVSNQHEVDHLNELLEEAEGMVRDLHNKLEKKDGITNTEHGSEAIENATESPKADNFELTSDIEAELEAELVRLEQNMTNIMEVDSDIEADMAKGDLNLDSVTWQLDSRTESDHGDNNESTSRPVFTPNYTVSPLDLRLRLHELIESELRARIEELEAVLENQNGQSKPHSPQSQEENSFWDFDHTRIESSSSTP 388
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati7g00471 388 PANTHER EMB|CAB62613.1 1 357 IPR040348 GO:0008356(InterPro)
Cati7g00471 388 MobiDBLite consensus disorder prediction 227 249 - -
Cati7g00471 388 MobiDBLite consensus disorder prediction 355 388 - -
Cati7g00471 388 Coils Coil 250 277 - -
Cati7g00471 388 MobiDBLite consensus disorder prediction 301 320 - -
Cati7g00471 388 Coils Coil 339 359 - -
Cati7g00471 388 MobiDBLite consensus disorder prediction 23 43 - -
Cati7g00471 388 Coils Coil 201 224 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati7g00471 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr7:4370087 Cati9g00961 Cati-Chr9:8364901 dispersed