AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar13g00314 ATGGAAGAAAAATTCGACAAGGTGAAGCCTCAAATTATAGTTGAGGAATGGAGTGGATCTTCTTTGAACAAACTCTCGTTGACTGCCGTTATATCGCCGTCTTCTTCTTCGTCTTTCACCTTGAAAAGACACGGTAATCGATTCAACATTTTCTCCCGAAGGTTTATCGAAGCGTTTGTTCCAGAGGGGTTTCCGAGCAGCGTGACTCCAGATTATATTCCTTTTCAGACATGGGATCTATTGCAGTATCTACTTCACCAGGCTCTTCTAAGTGCTATAGGAGTTGGGGAGAAATCAGCAACTGTAATTGGGGCTACTTTTCAGTGGTTTTTGAGGGATTTAACTGGAATGCTAGGAGGTGTCATGTTCACATTCTACCAGGGCTCAAACCTAGACAGCGATGCCAAAATGTGGCGTTTGGTTGCAGACCTAATGAATGATCTTGGAATGCTGATGGACCTTCTTTCTCCATTGTTTCCTTCGGCATTTGTATTCATTGTCTGCTTAGGGAGCTTGTCAAGATCTTTCACTGGTGTTGCCAGTGGAGCAACTAGAGCTGCTTTGACCCAGCATTTTGCTCTTCAGAATAATGCTGCAGATATATCTGCAAAGGAAGGAAGCCAGGAGACAGTTGCAACAATGATGGGAATGGCTTTAGGAATGTTTCTTGCACACATTACGATGGGACACTCAACAATAATATGGTTCTCTTTTCTGTCGCTCACCATGTTCCACATGTATGCTAATTACAAAGCTGTAAGGTGTCTTAATCTGACTACATTAAACTGTGAAAGAAGCTCAATTCTTTTGCTGCATTTCATGGAGACTGGCCGAGTTCTCTCTCCAAAAGAGGTCTCAGACTTGGAGCATGTTTTACCGTTATGGATAAGTTCTTGGAGCTCAAAGCGTACCAAACTTTTGTATGCACGGGTACGCTTAGGTGCGAGGGTTTCCTCACTTGACAGCCTGGAAATGATGGAGCTATTAAGTTCTGCTGGATCTCGATATGAGAAAGCAAAATACATGCTACTTGAGAAGAAGGGAATCATCAGCATTGTCATGCATAAAGATTCAACTACTGGAGATGTCATGCAAGGGTTCATGCATGCTCTTGTTATGGCAAATCTTGTAGATGATAAGCCTACGTCATTACATACAGATAGCCAAACATGGATGGACAAACACTATGAAGCCTTTGTTTTGAAGCTTCAATCATCTGGTTGGAAAACGGAGCGCCTTTTGTCTTCGTCAATCATCTGGAGGGCAAACTGGAGCCATGGGGCTCCAGATAAGAAGATAAACTAG 1305 42.91 MEEKFDKVKPQIIVEEWSGSSLNKLSLTAVISPSSSSSFTLKRHGNRFNIFSRRFIEAFVPEGFPSSVTPDYIPFQTWDLLQYLLHQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVMFTFYQGSNLDSDAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMMGMALGMFLAHITMGHSTIIWFSFLSLTMFHMYANYKAVRCLNLTTLNCERSSILLLHFMETGRVLSPKEVSDLEHVLPLWISSWSSKRTKLLYARVRLGARVSSLDSLEMMELLSSAGSRYEKAKYMLLEKKGIISIVMHKDSTTGDVMQGFMHALVMANLVDDKPTSLHTDSQTWMDKHYEAFVLKLQSSGWKTERLLSSSIIWRANWSHGAPDKKIN 434
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar13g00314 434 PANTHER RUS1 FAMILY PROTEIN C16ORF58 11 424 IPR006968 -
Ccar13g00314 434 Pfam Vitamin B6 photo-protection and homoeostasis 52 276 IPR054549 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar13g00314 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
944622 Ccar Ccar13g00314 Ccar-Chr13:3789788 Ccar16g00663 Ccar-Chr16:16773483