Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar13g00318	ATGGATTTTTCTCCGGCGGCTCGCCGGACGAGCAAAAAGCCGACAAAATCAGAGCTCTACTCAACGTTTGTAGTACATAACGATGAGGAAGATGATGAAGCACAAAAGCAGAAAAACCCTAAAAAGGAAAGAGAGAGTGAATCAATATCGGGGACAGTGGTGCGGCGGACTAGTGGCGGAATGTCAACGATGAGTAGAGCGGTGGCTAGTATGCATGCGGTAGGAGAAGGATTTGGGAAGCCAAGGAAAGGGAGTGGTACGCCGACGTCATCTTCACAGGATGAAGAAGGAGGGTATTCACGGCGGCAGACAAGCAAAATGTCTTCCGGTTCTATTGCAGATAGTATTACGAGAGAAGATCCATCTACCAAGTACGAATTGCTTCATGAACTTGGAAAAGGTTCTTATGGGTCTGTTTACAAAGCTCGCGATTTGAAAACTTCGGAAATGGTTGCAATCAAAGTGATATCATTATCTGAAGGGGAGGAAGGGTATGAAGAAATTCGTGGTGAAATAGAGATGTTGCAGCAATGCAGTCATCCTAATGTTGTTCGATACCTAGGAAGTTACCAGGGTGAGGAATACCTCTGGATTGTAATGGAGTATTGTGGTGGAGGAAGTGTTGCTGATTTGATGAATGTTACTGATGAGCCTTTAGAGGAGTACCAAATTGCATATATATGTAAGGAAGCATTAAAGGGTTTGTCCTATTTGCATTCAATCTTCAAAGTGCATCGTGATATTAAGGGCGGTAATATCTTGTTGACTGAACAAGGAGAGGTCAAGTTGGGTGATTTTGGTGTTGCTGCACAGCTGACAAGGACAATGTCCAAACGTAACACGTTTATTGGTACTCCCCACTGGATGGCTCCTGAGGTTATCCAGGAGAGTCGATATGATGGGAAGATGTGTGGGCCCTTGGGGTGTCTGCAATTGAAATGGCTGAGGTCTCTTGTGTTCCATGATTTCATTGCAAAATGCCTTACGAAAGACCCTCGCATTCGTCCCACTGCATCTGAGCTGCTAAAGCATAAATTTATAGAAAAATGCAAAAGTGGAGCTTCTGCAATGTTACCCAAGCTTGAGAGGGCAAAGCAAAATAGGGCTTCTATGGCATTGGAAGCAGAAAATGTTGCTGCAGAGACCGTACCTGGATATGGGACACTGGGAGCAAAAATGAATGAAGACTTCGGAGATACTGTTCCGTCGAAGCCTCATCAAGTGCCTAATGGAGTACCTGTTGTAGGTGGTTCAGTACAAGCTGATGGTTTGGAAGACGCTGGAGAAGGTGATTTTGGAAGTGTCATAATTCATGGTGGAGTGGCTATAGATAAGACAGCTGCTAAAACACCTGTTCCAACAGCAAACAAGCCCTCATCTTCTTCAGCACGTGGCCAAATGTCGTCAACTGCTGATTCTGGAGAAGATTCAGTTATTCCATGGGTGACCAAGAAAGATGGTGCATCCACAGATACATTTCGTATTGTTGAATCACCGGCTACTGAACACACAGCTCAAGCCATTGGAAGCAGCCGTGCTGTCATCAGTGGCACAACTAAGAAAGACACTGTTAATCGCAAAGCACTGGACAAGTTGTGGTCTATATATGCCGCTGGAAACACAGTGCCAATTCCTTTTTTGAGGGCAACTGATATATCTCCGATTGCATTGTTGTCTGAGAATGTGCTTGGAAGTCAGCATGTGGATAATGTTGGAAGTGTAGCTGTAGAAGCATTGCAAGAGCTTTTCACGAGCGATGGACAGTCTAAGAAGGGTCGAAGGCAAAACGAGCTGCCTCTTCCTCCAAGTGTATACCAGAGACTCACATCAAGTCCAACATTGATGAATCTCGCACAGGCGTGCTATGAAGAGATGCCACTGCAGGAACTACAAGCAGCTCAAGAACAACAAACCATTCAGAACCTTTGTGATACCCTTCGAACTATTTTACGGCTATAG	1959	44.92	MDFSPAARRTSKKPTKSELYSTFVVHNDEEDDEAQKQKNPKKERESESISGTVVRRTSGGMSTMSRAVASMHAVGEGFGKPRKGSGTPTSSSQDEEGGYSRRQTSKMSSGSIADSITREDPSTKYELLHELGKGSYGSVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLEEYQIAYICKEALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKMCGPLGCLQLKWLRSLVFHDFIAKCLTKDPRIRPTASELLKHKFIEKCKSGASAMLPKLERAKQNRASMALEAENVAAETVPGYGTLGAKMNEDFGDTVPSKPHQVPNGVPVVGGSVQADGLEDAGEGDFGSVIIHGGVAIDKTAAKTPVPTANKPSSSSARGQMSSTADSGEDSVIPWVTKKDGASTDTFRIVESPATEHTAQAIGSSRAVISGTTKKDTVNRKALDKLWSIYAAGNTVPIPFLRATDISPIALLSENVLGSQHVDNVGSVAVEALQELFTSDGQSKKGRRQNELPLPPSVYQRLTSSPTLMNLAQACYEEMPLQELQAAQEQQTIQNLCDTLRTILRL	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	51	65	-	-
	Ccar13g00318	652	Coils	Coil	361	381	-	-
	Ccar13g00318	652	SMART	serkin-6	125	347	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	452	476	-	-
	Ccar13g00318	652	Pfam	Protein kinase domain	125	301	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Ccar13g00318	652	ProSiteProfiles	Protein kinase domain profile.	125	347	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Ccar13g00318	652	FunFam	Aurora kinase A	117	206	-	-
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	448	478	-	-
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	23	50	-	-
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	1	15	-	-
	Ccar13g00318	652	SUPERFAMILY	Protein kinase-like (PK-like)	124	348	IPR011009	-
	Ccar13g00318	652	Gene3D	Transferase(Phosphotransferase) domain 1	121	383	-	-
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	84	118	-	-
	Ccar13g00318	652	PANTHER	SERINE-THREONINE-PROTEIN KINASE TAO	317	379	IPR050285	GO:0006468(PANTHER)\|GO:0035556(PANTHER)\|GO:0043408(PANTHER)
	Ccar13g00318	652	MobiDBLite	consensus disorder prediction	1	120	-	-
	Ccar13g00318	652	ProSitePatterns	Protein kinases ATP-binding region signature.	131	154	IPR017441	GO:0005524(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar13g00318	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	944626	Ccar	Ccar13g00318	Ccar-Chr13:3824137	Ccar15g00721	Ccar-Chr15:12647610
	957595	Ccar	Ccar13g00318	Ccar-Chr13:3824137	Ccar6g00694	Ccar-Chr6:17999901

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ccar7g00099	ACH	7	661	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	60.921	0.0	807.0
	Ccar8g01022	.	112	499	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	66.327	0.0	520.0
	Ccar8g01023	.	508	680	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	39.674	2.80e-30	116.0
	Ccar8g01021	.	33	102	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	91.429	1.20e-29	115.0
	Ccar15g01228	.	40	691	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G10730	64.865	0.0	899.0
	Ccar4g00752	ACH	4	497	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	56.174	0.0	596.0
	Ccar6g00694	ACH	7	565	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	60.297	0.0	694.0
	Ccar5g01527	ACH	6	182	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	79.096	3.40e-104	311.0
	Ccar13g00318	.	185	836	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	61.469	0.0	734.0
	Ccar1g01669	.	248	500	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	25.938	5.75e-25	108.0
	Ccar2g02091	.	102	667	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G53165	48.229	6.32e-150	443.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Ccar	Pkinase	2.1e-52	CL0016		PK	STE_STE20-Pl