Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar13g00320	ATGCCAACTTTAACGAAGCTATACACGATGCAAGAAGCTTCGGAGCACAATTCCGCCGGCGATTGCTGGGTTGTTGTCGACGGCAAGGTGTATGACGTGTCATCGTATTTGGAAGAACACCCAGGTGGAGATGATGTCCTCCTTCAGGCTACTGGGAAAGATGCGACAGATGAATTTGAAGACGCAGGGCATAGCAAAAGCGCTAGGGAACTTATGGAGAGTTTCTGTGTCGGGGAGCTGGACACGTCAGACATCCCTCAACTAGAGGTTATTTCGGAAAAACAAACCAATTACATATCCGAGAAGCTGGTCGATCTGAGCAAGCAATACTGGGCGATCCCGGTAGCAGCCATCGGCATATCGGTGGTTGTCACCTTCTTGTACTTGCACAAGAAGTAG	399	49.37	MPTLTKLYTMQEASEHNSAGDCWVVVDGKVYDVSSYLEEHPGGDDVLLQATGKDATDEFEDAGHSKSARELMESFCVGELDTSDIPQLEVISEKQTNYISEKLVDLSKQYWAIPVAAIGISVVVTFLYLHKK	132

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar13g00320	132	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	5	81	IPR001199	-
	Ccar13g00320	132	SMART	Cyt-b5-2	8	81	IPR001199	-
	Ccar13g00320	132	PRINTS	Cytochrome B5 signature	30	40	IPR001199	-
	Ccar13g00320	132	PRINTS	Cytochrome B5 signature	68	80	IPR001199	-
	Ccar13g00320	132	PRINTS	Cytochrome B5 signature	55	62	IPR001199	-
	Ccar13g00320	132	PRINTS	Cytochrome B5 signature	40	54	IPR001199	-
	Ccar13g00320	132	PANTHER	CYTOCHROME B5	4	127	IPR050668	GO:0016020(PANTHER)\|GO:0020037(PANTHER)\|GO:0043231(PANTHER)
	Ccar13g00320	132	FunFam	Cytochrome b5 type B	3	85	-	-
	Ccar13g00320	132	Gene3D	-	3	86	IPR036400	-
	Ccar13g00320	132	Pfam	Cytochrome b5-like Heme-Steroid binding domain	9	81	IPR001199	-
	Ccar13g00320	132	ProSitePatterns	Cytochrome b5 family, heme-binding domain signature.	36	43	IPR018506	GO:0020037(InterPro)
	Ccar13g00320	132	SUPERFAMILY	Cytochrome b5-like heme-steroid binding domain	4	93	IPR036400	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar13g00320	K23490	cytochrome b5

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	944627	Ccar	Ccar13g00320	Ccar-Chr13:3861332	Ccar13g01147	Ccar-Chr13:17459292
	957596	Ccar	Ccar13g00320	Ccar-Chr13:3861332	Ccar12g00612	Ccar-Chr12:7879861

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ccar14g00627	ACH	1	134	NADPH P450 reductases gene family	AT5G53560	58.824	4.73e-51	157.0
	Ccar11g00089	.	6	127	NADPH P450 reductases gene family	AT2G32720	42.424	3.00e-35	117.0
	Ccar16g00918	ACH	30	134	NADPH P450 reductases gene family	AT5G48810	49.524	1.01e-33	112.0
	Ccar10g00440	.	3	59	NADPH P450 reductases gene family	AT5G53560	38.596	1.26e-11	58.9
	Ccar5g00889	.	86	132	NADPH P450 reductases gene family	AT5G17770	87.234	4.86e-23	89.7
	Ccar5g00657	ACH	35	281	NADPH P450 reductases gene family	AT5G17770	78.947	2.65e-146	409.0
	Ccar13g01147	.	1	133	NADPH P450 reductases gene family	AT5G53560	72.932	1.78e-72	211.0
	Ccar13g00320	.	1	134	NADPH P450 reductases gene family	AT1G26340	62.687	9.70e-60	179.0
	Ccar3g00010	.	1	134	NADPH P450 reductases gene family	AT5G53560	54.478	5.84e-46	142.0
	Ccar1g02581	.	2	120	NADPH P450 reductases gene family	AT1G60660	55.882	1.92e-47	147.0
	Ccar2g00993	.	2	120	NADPH P450 reductases gene family	AT1G60660	63.025	2.88e-49	151.0
	Ccar2g00907	.	39	281	NADPH P450 reductases gene family	AT5G17770	36.719	5.08e-53	173.0
	Ccar2g00376	ACH	31	281	NADPH P450 reductases gene family	AT5G17770	84.064	1.58e-163	453.0
	Ccar2g00248	.	6	134	NADPH P450 reductases gene family	AT2G32720	61.24	2.54e-54	165.0