Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar1g01779	ATGATTTCAGCGACTGGATGGTTGAGACCCACAATCGGAACAAGATCACCATCTCCAAATCCCAAATCTTTTAAGCTTCGTGCGTCTTTCATCGAATACCCTCTAGCTAGCAAAATCATGGTCAGAAATTTATCATACTCTACCAGTGAAACCTGTTTAAAGGAACAATTTTCGAATTTTGGGCAGATAGCTGAAGTTAAGCTTGTTAAGGATGAAACCACAAAGAAATCAAAAGGACAGACACAGTGCGTACCCGAAAACCTCTGGACCACCCCAGCCCCAGCCCCAAAGACCAGTCTCCGCAGAATAGGAGACGGAAGATTAACGACCACATGA	336	44.05	MISATGWLRPTIGTRSPSPNPKSFKLRASFIEYPLASKIMVRNLSYSTSETCLKEQFSNFGQIAEVKLVKDETTKKSKGQTQCVPENLWTTPAPAPKTSLRRIGDGRLTTT	111

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar1g01779	111	MobiDBLite	consensus disorder prediction	1	20	-	-
	Ccar1g01779	111	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	37	79	IPR000504	GO:0003723(InterPro)
	Ccar1g01779	111	Gene3D	-	36	80	IPR012677	-
	Ccar1g01779	111	Pfam	RNA recognition motif	39	79	IPR000504	GO:0003723(InterPro)
	Ccar1g01779	111	MobiDBLite	consensus disorder prediction	74	111	-	-
	Ccar1g01779	111	MobiDBLite	consensus disorder prediction	78	94	-	-
	Ccar1g01779	111	SUPERFAMILY	RNA-binding domain, RBD	18	80	IPR035979	GO:0003676(InterPro)
	Ccar1g01779	111	PANTHER	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	18	79	IPR052462	GO:0003729(PANTHER)\|GO:0005737(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar1g01779	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr1:21782216	Ccar3g01389	Ccar-Chr3:34749988	transposed