AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g01772 ATGTTGACTAGTGGAGGAGGAGGAGGAACCTTTTACTGGGTTCGAAATGAGGAGACACCATCTTCAACCAGAGTCGAAGGAATCGTTGTAATTTTCGCTTGGGGTTCTTCTCTTGAAGAGTACCACTTGAAGAATTATGTGAATCTTTATTCGTCTCTCGGTTGGAATTCTCTTCTTGTTCTTTCCGATTTTCTGAACCCATTTCTTCCCGATAGAGCCACATCACTTGCATTTTCTGTTCTCAATGAGCTTTTAGAGGAGTTGAGGACTAGACCATCCCCTTTAGTCCTTGCTTCCCTTTCTGGCGGGTCACAGGCTTGTATGTATAAGATCATTGAAGGAACATGTGAAGCACATCTCAGTCTGGATGATAGTCGATTGATCATGACCTGCATCTCTGGTCAAATGTACGACTCTGGTCCGGTAAATGTTACTGGCGATTTGGGTGCTCGGTTTGCTCTACATTCCTCCGTTCTCAACCTGCCCGGTTCATCAAAGTTGGTGTCATTGGTTGCAAAAGGTGTCACGTCTGGTTTGGATGCTCTCTTCCTTACTAGATTTGCATCCCAACGCTCCGAGTATTGGCAAACGCTTTACTCCTCTGTTGGTTTGGGGGCCCCATTTCTCATATTATGTTCGGAAAATGATGATCTTGCTCCATATCCGGTTATATGCTCATTTGCTCGACAAGTACAAGGATTAGGAGGACATGTTCGACTTATCGGATGGAAGGACTCTCCGCATGTAGCTGTGACGGAGTTTCTTGAGCACTCTACTTCGATATTTAACCAAAAACTAGAAAAAGTTGGTGAAAGATGTGGCATGGAGGGTATGCACGATAAGATATACGAACTAATTTGCGACCTCCAGAATGCAGCAGTGGACTCAAACCAGAGCCTTAGAAGAGTAGCGGTTGGACCAAACGACCACTTCTTCCTGCCAAGTTCTGAAACTGGTAAAGAATCTGGATCCTTACAAGACGAGCAGAAAGAAAGAAGAGGTGTCCATTTGGCAAGTCCTCCTCCTCCTCCGAGACTTAACCCTCACAGCGTTCTTGGTCAAGTCCTGTTTGATGTGTGTGTGCCCAAGAACATTGAAGGTTGGGATATTAAGTTCGATAAGAGGCAGCCATTTGCATCTGCTCGTAAACGATCATCTCTAAATGCATTAAAGCGCATGCGACGCTCAAAATTATAA 1197 44.78 MLTSGGGGGTFYWVRNEETPSSTRVEGIVVIFAWGSSLEEYHLKNYVNLYSSLGWNSLLVLSDFLNPFLPDRATSLAFSVLNELLEELRTRPSPLVLASLSGGSQACMYKIIEGTCEAHLSLDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSVLNLPGSSKLVSLVAKGVTSGLDALFLTRFASQRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFARQVQGLGGHVRLIGWKDSPHVAVTEFLEHSTSIFNQKLEKVGERCGMEGMHDKIYELICDLQNAAVDSNQSLRRVAVGPNDHFFLPSSETGKESGSLQDEQKERRGVHLASPPPPPRLNPHSVLGQVLFDVCVPKNIEGWDIKFDKRQPFASARKRSSLNALKRMRRSKL 398
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g01772 398 MobiDBLite consensus disorder prediction 312 348 - -
Ccar2g01772 398 SUPERFAMILY alpha-beta-Hydrolases 11 253 IPR029058 -
Ccar2g01772 398 PANTHER UNCHARACTERIZED 8 252 IPR008547 -
Ccar2g01772 398 Pfam Eukaryotic protein of unknown function (DUF829) 132 368 IPR008547 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g01772 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:63634535 Ccar6g00359 Ccar-Chr6:11730694 dispersed
Ccar Ccar-Chr2:63634535 Ccar4g00496 Ccar-Chr4:14725336 wgd