Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ccar2g01772 | ATGTTGACTAGTGGAGGAGGAGGAGGAACCTTTTACTGGGTTCGAAATGAGGAGACACCATCTTCAACCAGAGTCGAAGGAATCGTTGTAATTTTCGCTTGGGGTTCTTCTCTTGAAGAGTACCACTTGAAGAATTATGTGAATCTTTATTCGTCTCTCGGTTGGAATTCTCTTCTTGTTCTTTCCGATTTTCTGAACCCATTTCTTCCCGATAGAGCCACATCACTTGCATTTTCTGTTCTCAATGAGCTTTTAGAGGAGTTGAGGACTAGACCATCCCCTTTAGTCCTTGCTTCCCTTTCTGGCGGGTCACAGGCTTGTATGTATAAGATCATTGAAGGAACATGTGAAGCACATCTCAGTCTGGATGATAGTCGATTGATCATGACCTGCATCTCTGGTCAAATGTACGACTCTGGTCCGGTAAATGTTACTGGCGATTTGGGTGCTCGGTTTGCTCTACATTCCTCCGTTCTCAACCTGCCCGGTTCATCAAAGTTGGTGTCATTGGTTGCAAAAGGTGTCACGTCTGGTTTGGATGCTCTCTTCCTTACTAGATTTGCATCCCAACGCTCCGAGTATTGGCAAACGCTTTACTCCTCTGTTGGTTTGGGGGCCCCATTTCTCATATTATGTTCGGAAAATGATGATCTTGCTCCATATCCGGTTATATGCTCATTTGCTCGACAAGTACAAGGATTAGGAGGACATGTTCGACTTATCGGATGGAAGGACTCTCCGCATGTAGCTGTGACGGAGTTTCTTGAGCACTCTACTTCGATATTTAACCAAAAACTAGAAAAAGTTGGTGAAAGATGTGGCATGGAGGGTATGCACGATAAGATATACGAACTAATTTGCGACCTCCAGAATGCAGCAGTGGACTCAAACCAGAGCCTTAGAAGAGTAGCGGTTGGACCAAACGACCACTTCTTCCTGCCAAGTTCTGAAACTGGTAAAGAATCTGGATCCTTACAAGACGAGCAGAAAGAAAGAAGAGGTGTCCATTTGGCAAGTCCTCCTCCTCCTCCGAGACTTAACCCTCACAGCGTTCTTGGTCAAGTCCTGTTTGATGTGTGTGTGCCCAAGAACATTGAAGGTTGGGATATTAAGTTCGATAAGAGGCAGCCATTTGCATCTGCTCGTAAACGATCATCTCTAAATGCATTAAAGCGCATGCGACGCTCAAAATTATAA | 1197 | 44.78 | MLTSGGGGGTFYWVRNEETPSSTRVEGIVVIFAWGSSLEEYHLKNYVNLYSSLGWNSLLVLSDFLNPFLPDRATSLAFSVLNELLEELRTRPSPLVLASLSGGSQACMYKIIEGTCEAHLSLDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSVLNLPGSSKLVSLVAKGVTSGLDALFLTRFASQRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFARQVQGLGGHVRLIGWKDSPHVAVTEFLEHSTSIFNQKLEKVGERCGMEGMHDKIYELICDLQNAAVDSNQSLRRVAVGPNDHFFLPSSETGKESGSLQDEQKERRGVHLASPPPPPRLNPHSVLGQVLFDVCVPKNIEGWDIKFDKRQPFASARKRSSLNALKRMRRSKL | 398 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ccar2g01772 | 398 | MobiDBLite | consensus disorder prediction | 312 | 348 | - | - | |
| Ccar2g01772 | 398 | SUPERFAMILY | alpha-beta-Hydrolases | 11 | 253 | IPR029058 | - | |
| Ccar2g01772 | 398 | PANTHER | UNCHARACTERIZED | 8 | 252 | IPR008547 | - | |
| Ccar2g01772 | 398 | Pfam | Eukaryotic protein of unknown function (DUF829) | 132 | 368 | IPR008547 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ccar2g01772 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ccar | Ccar-Chr2:63634535 | Ccar6g00359 | Ccar-Chr6:11730694 | dispersed | |
| Ccar | Ccar-Chr2:63634535 | Ccar4g00496 | Ccar-Chr4:14725336 | wgd |